Halomonas alkalicola: B6N23_07945
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Entry
B6N23_07945 CDS
T09267
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
halw
Halomonas alkalicola
Pathway
halw02024
Quorum sensing
halw03060
Protein export
halw03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
halw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
B6N23_07945 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
B6N23_07945 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
B6N23_07945 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
halw02044
]
B6N23_07945 (ffh)
Enzymes [BR:
halw01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
B6N23_07945 (ffh)
Secretion system [BR:
halw02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
B6N23_07945 (ffh)
Eukaryotic Sec-SRP protein
B6N23_07945 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
CbiA
AAA_22
cobW
Helicase_RecD
AAA_16
ArsA_ATPase
AAA_33
AAA_30
YqeC
AAA_31
KTI12
AAA_14
APS_kinase
ResIII
Thymidylate_kin
nSTAND3
6PF2K
AAA_19
TctA
NACHT
TsaE
DnaB_C
Motif
Other DBs
NCBI-ProteinID:
WLI74792
UniProt:
A0ABY9H8G8
LinkDB
All DBs
Position
complement(1674605..1676014)
Genome browser
AA seq
469 aa
AA seq
DB search
MFQNLSERLSQTLKSIKGQARLTEDNIKDTLREVRRALLEADVALPVVKDFIERVRERAV
GQEVSKSLSPGQQFVKIVQQELEATMGEANEGLSLKGSPAVVLMAGLQGAGKTTSVAKLA
RYLKEREKKKVLVVSADVYRPAAIDQLETLAGEVGVDFFPSRSDQKPVDIAEAAIKHAKI
QFHDVLLVDTAGRLAIDEAMMAEIQALHKAVAPQETLFVVDAMTGQDAANTAKAFHEALP
LTGVILTKADGDARGGAALSVRHITGKPLKFMGVGEKVDALEPFHPDRIASRILGMGDML
SLIEEAERTVDKKKAEQLAKKVKKGEGFDLEDFRDQLQQLKKMGGMGGLLGKLPGMGQMA
ELAQGPGPEKELGKLEALINSMTPQERRRPEIINGSRKRRIAAGAGLQVPDLNRLLKQHK
QMQKMMKKAGKKGGMQKMMRGMSGMMGGGGPGGPGGMGGMGGPGGMPWR
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgtttcagaatctcagcgagcgtctgtcgcagacgctcaagtccatcaagggtcaggcg
cgcctgaccgaggacaacatcaaggacaccctgcgcgaggtgcgccgggcgctgctcgag
gcggacgtcgccctgccggtggtcaaggacttcatcgagcgggtgcgcgagcgtgcggtg
ggccaggaggtctccaagagcctctcgccgggccagcagttcgtcaagatcgtccagcag
gagctcgaggcgaccatgggcgaggccaacgagggcctctccctcaagggttcgccggcg
gtggtgctgatggcgggcctgcagggggcgggcaagaccacctccgtggccaagctggcg
cgctacctgaaggagcgcgagaagaagaaggtgctggtggtgtcggcggacgtctaccgt
ccggcggccatcgaccagctcgagaccctggccggggaggtcggcgtcgacttcttcccg
tcgcgctccgaccagaagccggtcgatatcgccgaggcagcgatcaagcacgccaagatc
cagttccacgacgtgctgctggtggataccgccggccgcctggccatcgacgaggcgatg
atggccgagatccaggcgctgcataaggcggtggcgccccaggagacgctgttcgtcgtc
gacgccatgaccggccaggacgccgccaacacagccaaggccttccacgaggcgctgccg
ctgaccggggtgatcctcaccaaggcggacggcgacgcccgcggcggggcggcgctgtcg
gtgcgccacatcaccggcaagccgctcaagttcatgggcgtgggcgagaaggtcgacgcc
ctggagcccttccacccggatcgcatcgcctcgcggatcctcggcatgggcgacatgctg
tcgctgatcgaggaggccgagcgcaccgtcgacaagaagaaggcggagcagctggcgaag
aaggtcaagaagggcgagggcttcgacctcgaggacttccgcgaccagctccagcagctc
aagaagatgggcggcatgggcggcctgctcggcaagctgcccggcatgggccagatggcc
gagctggcccagggccccggcccggagaaggagctcggcaagctcgaggcgctgatcaac
tccatgacgccccaggagcgccgccgccccgagatcatcaacggctcgcgcaagcggcgc
atcgccgccggcgccggcctgcaggtgcccgacctcaaccgcctgctcaagcagcacaag
cagatgcagaagatgatgaagaaggcgggcaagaagggcggcatgcagaagatgatgcgc
ggcatgtccggcatgatgggcggcggcggccccggtggtcccggtggcatgggcggaatg
ggcggccccggtgggatgccctggcggtag
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