Natrinema halophilum: HYG82_14545
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Entry
HYG82_14545 CDS
T06745
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
haly
Natrinema halophilum
Brite
KEGG Orthology (KO) [BR:
haly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
haly03016
]
HYG82_14545 (thpR)
Enzymes [BR:
haly01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
HYG82_14545 (thpR)
Transfer RNA biogenesis [BR:
haly03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
HYG82_14545 (thpR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
HVSL
Motif
Other DBs
NCBI-ProteinID:
QLG49986
UniProt:
A0A7D5GUD5
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All DBs
Position
3062410..3062973
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AA seq
187 aa
AA seq
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MQKRLFVSVDLPDEFAEPIADLQTDLEGASGLSFTDPEQAHITMKFLGDVDADRLPALER
ELEAAVDDADVAPFTVRYGGLGVFPSFEYITVVWMGVEHGGEQLAKLFEAIENRTTVMGF
DAENHDFTPHVTLARMEHAGGKDRVQEFVRERDPTIGETRVNEVRLTESTLTDDGPVYST
VASFPLE
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagcgactgttcgtcagcgtcgacctccccgacgagttcgccgaaccgatcgcc
gacctccagactgatctcgagggtgcaagtgggctcagcttcaccgatcccgagcaggcc
catataacgatgaagttcctcggcgacgtcgacgcggatcggctccccgccctcgagcgg
gaactcgaggccgccgttgacgatgccgacgtcgctccgttcaccgtccgatacggcgga
ctcggggttttcccgagtttcgagtacatcaccgtcgtctggatgggcgtcgagcacggc
ggcgagcagcttgcgaagttgttcgaggcgatcgaaaaccggacgacggtgatgggattc
gacgccgaaaaccacgatttcacccctcacgttacgctggcacgaatggaacacgccggc
ggaaaagaccgagttcaggagttcgttcgggaacgcgatccgaccatcggcgaaactcgc
gtcaacgaggtccgattgaccgaaagcaccctcacggacgacggaccggtctactcgacg
gtcgcgtcgttcccgttagagtga
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