Homarus americanus (American lobster): 121871023
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Entry
121871023 CDS
T07477
Name
(RefSeq) intraflagellar transport protein 140 homolog
KO
K19672
intraflagellar transport protein 140
Organism
hame
Homarus americanus (American lobster)
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
hame03037
]
121871023
Cilium and associated proteins [BR:
hame03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
121871023
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_IF140-IFT172
Beta-prop_IFT140_1st
Beta-prop_IFT140_2nd
TPR_IF140_C
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_WDR19_1st
Beta-prop_EML_2
WDR55
ANAPC4_WD40
Beta-prop_EML
TPR_COPA_B
TPR_GEMI5
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
TPR_IFT80_172
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
EIF3I
VPS8_N
SNAP
TPR_12
Motif
Other DBs
NCBI-GeneID:
121871023
NCBI-ProteinID:
XP_042229013
LinkDB
All DBs
Position
Unknown
AA seq
1485 aa
AA seq
DB search
MTLYFDCIVDSPHASAINTQIAWHPQATCLAVAAYSEDKGGTVNVYTGEGKLCHEVDIPP
HPTAQVTSIVWHPSKRIMAVGWESGELFLWNDHEHELHEIQSLHRAPISVLKFSVGGTRL
VSADASGATVGWRVDNSGNLQTVFTHELKDPLVQIVYRVNINTDKNLSTSDISGLARAAV
SGDERALDIFSSWRPRTGHKRITLAANTKDNLDFFLGSSTGVLYHVSDSGNCVEVLQADG
GIKRLLHHESRNLLVVITESMVLGQFTVATDGSVTESNKVKLSGRSNDIQVSWAGIGLLA
VSTGDSSVRLWNLDSGDNYVLSLHGPSYRDQEYVMCLTYSENKKILCAGTNLGSVAMWKY
EEHTSKPGEDDYTRDPEKDWKLQNPSVISGAVKQVSWGSTQNLLAVNTVRDVYILNEQHM
VASYKDQVSVVQLSPTQLSVDVFSGGSHLELRAEIQVRGVHNSVDHLLLWNMKKMVVYEI
TSDATHLRVVASFPCEAESAVLHEGSVYSIESGSIQVRSLQGTVKQTLNFTESEGEPIGL
DVCGNFLVTATLQGIVKLWDLSRREAKPHTQGKQMSDAIKDFGEIISARCNCNGTRVSIA
VAQSSLLPDPKLYIWDIENDNITYFNFASGRSEDDDVDGTAPPNSADSTNSKDGGLHDRA
KRETAREVGGRFVMSHLWDLEDPRLLVCEAKSLLSTKKQRDHYLSSTTKADRPAVMLVSL
FVSSDHGNIVQDSFPLTPTYSRLLGVQVPFFYLLKVHDPENKSDAKAVTQRVMRDFVGLE
SCDRPTKDAMLNFSFFLSIGNMDDAFKAIKAIKSETVWENMAKMCVKTKRLDVAALCLGN
MGHARGARALRHAMKEPQIDARVAMLALQLGMLEEAERLYRGCGRYDLLNRFYQDGGIWS
KALEAAEGNDRIHLRSTHYNYAKHLESKGDFSGAISHYEKSDTHRFEVPRMLFDDLPTLE
DYIMHTKDKALRRWWAQYLESTGEMETALQFYEAAHDHLSLVRVYCYCNNLQKAADIANE
TGDRAACYHLARQYENVAQVKEAIHFFTRAQAFGNAIRICKENGHEDQLMNLALVAGPQE
QIDAARYFSSNERRQLPKAVMLYHKAGLLSKAVDLAFKSGQISAVGQIAGELDESADPAL
IQRCAQYFISNGQYDRAVSLLITGKQYSDALDLCVEHNVWVTEELAERFTLPKDESARNQ
ILEKVAECAYAQDNYKLATKKFTQAGNKVKAMKCLLKSGDTERIVYFANVCRQREIYIMA
ANYLQSLDWRKEPDIMRNIIQFYSRAKATALLAGFYDSCAQVEIDEFQNYEKAAGALNEG
YKALMTSSDPQAQERVPAFQYKLEKVKQFLGIKRMFATDGDSAIQELQELLADPNIEVAV
RQGDIYAVIVEYYASNNNFKSALGALQEMKSKLPKANPNYYVEAQTLQAISRTTGVNFGR
TENGGLDEGGSEEEGNASEEEVVEEEEEDERPQQHFAHNGSAKFF
NT seq
4458 nt
NT seq
+upstream
nt +downstream
nt
atgacactgtactttgactgtatagtcgatagcccccatgcaagtgccatcaatacccaa
atagcatggcacccccaggctacatgtcttgctgtagctgcttacagcgaagataaagga
ggaacagtgaatgtttacacaggggagggtaaactgtgccatgaggttgatattccacca
catccgacggctcaggttacatccattgtttggcaccccagcaaaaggattatggcagtt
ggctgggagtcaggagaactgttcctttggaacgaccatgaacatgaactccatgaaatt
cagagtctccatcgagcacctatctccgttctcaagtttagtgtgggtggaacaagactt
gtgtctgcagatgcctctggtgctacagtgggctggcgggtggataactctggaaatctg
cagacagtatttacacacgagttgaaagatccccttgtacagattgtctacagagtcaat
atcaacacagacaagaatctttcaacatcagatatcagtggtcttgctcgtgctgctgtg
agtggtgatgagagagccttggatatctttagctcctggaggccaaggacagggcacaaa
cgcatcactcttgctgctaatactaaggacaatcttgactttttcttaggatcatctact
ggtgtgctgtatcatgtcagtgacagcggtaactgtgttgaggtgcttcaggctgatggt
ggaataaaacgtctattacatcatgaatccagaaacttgcttgtggtaatcacagagagc
atggttctagggcagtttactgttgcaacagatgggtctgtcacagaaagcaataaggtc
aagttgagtggacgaagtaatgatattcaggtttcctgggcaggcattgggttgctggcc
gtatcaacaggagacagttctgtacgtctttggaacttagattctggtgataattatgta
ttaagcttacatggaccaagctatcgtgatcaagaatatgtcatgtgtttaacttattct
gaaaataaaaagatcctttgtgctggaacaaaccttggtagtgtggcaatgtggaagtat
gaggaacatacaagtaagcctggggaagatgattatacgagggatcctgagaaagattgg
aagttacaaaatccttcagttatctcaggagcagtgaaacaggtttcatgggggtccact
caaaacttattagcagttaacacagttcgggatgtttacatattaaatgagcagcacatg
gttgctagctacaaagatcaggtatcagttgtgcaactatctccaactcagctgtcagta
gatgtattctctgggggcagtcacttagagctacgggcagaaattcaagtgcgaggcgtc
cataactcggtggatcaccttctgctgtggaatatgaagaagatggttgtttatgaaata
acttctgatgctactcatcttcgagttgttgcatcattcccatgtgaagctgaaagtgca
gtcttacacgaaggtagtgtatattccattgagagtggcagtattcaagtgcgttccctc
cagggtacagtgaagcagaccctcaacttcacagagagtgaaggtgaaccaatcggcctt
gatgtatgtgggaattttttggtaactgctactcttcaaggaattgtaaaactctgggac
ctgtccaggagggaagccaagcctcatacacaaggcaagcagatgagtgatgccatcaaa
gactttggggagatcatctctgctcgctgtaactgtaatggtactagggtgtccattgct
gttgctcagtcatctcttcttccagatcctaagctctacatttgggatatagaaaatgat
aacataacttactttaattttgcgtcgggtcggtcagaggatgatgatgtagacggaact
gctccaccaaactcagctgatagtactaattctaaagatggtgggctgcatgacagagca
aaacgtgaaactgcacgagaagttgggggtcgctttgtaatgtcacacttgtgggatttg
gaagaccctcgtctgcttgtatgtgaagcaaagtcacttctcagcaccaaaaagcagagg
gatcactacctatcctcgacaaccaaggcagatcggccagctgttatgttggtgtccttg
tttgtgagttctgaccacggcaacatcgtccaagactccttcccattgactcctacgtac
tctcgactgcttggagtgcaggtcccattcttttacctccttaaagttcatgatcctgaa
aataagtctgatgccaaagctgtgacacagagagtgatgagagattttgtgggcttagag
agctgtgataggccaactaaagatgccatgcttaacttctctttcttcctctctattgga
aatatggatgatgctttcaaagccattaaggctattaaaagtgaaactgtttgggaaaat
atggccaagatgtgtgtcaaaactaagcgcttggatgtggcagctctttgtttgggcaac
atgggtcatgcacgtggagcaagagctctacgacatgccatgaaggaaccacaaatagat
gctagggtggcaatgttggctctgcaacttggtatgctggaggaagcagaacgtttatac
cgtggctgtggacgatatgacttgttaaatcgcttttatcaggatggtggaatttggtct
aaggcacttgaagctgcagaaggcaatgacagaattcaccttcggtcaacacattacaat
tatgcaaagcatttggagagtaaaggagacttcagtggagccataagccactatgaaaaa
tcagacacccacaggtttgaagttcctcgaatgctttttgatgatttgcctacacttgaa
gactatataatgcataccaaagataaagctttgagaagatggtgggctcagtatttagaa
tcaactggtgaaatggagacagcacttcagttctatgaagctgctcatgatcacttgtcc
ttagtgagagtctactgctactgtaataatcttcagaaggctgcagatattgctaatgaa
accggagacagagcggcgtgttatcacttggcacgacagtatgagaatgtggcacaggtg
aaggaggccattcacttctttacacgggcccaagcatttggaaatgccatcaggatatgc
aaagagaatggacatgaagatcaattaatgaatctagcacttgtggctggacctcaagaa
caaattgatgccgcaagatacttctcctccaatgaacgccgtcaacttcccaaagcagta
atgctttaccataaggcaggacttctgtctaaagcagttgatttagcattcaaatctggt
cagataagtgcagttggacagattgctggagaactagatgagagtgcagatccagcactt
atccagagatgtgcacagtacttcatatccaatgggcagtatgatcgtgctgtatcttta
cttatcactgggaagcagtattctgatgctctcgacttgtgtgtcgagcataatgtttgg
gtcacagaagaattggctgaaagatttaccctacctaaggacgagtcggctcgcaaccag
atcttagagaaggtggccgagtgcgcttatgctcaggataattataaacttgctactaag
aagttcactcaagcaggaaataaggtcaaagcaatgaagtgtcttctgaaatcaggcgac
acagagcggatcgtatactttgccaacgtttgccgtcaacgagagatatacatcatggca
gcaaattacctgcagagcttagattggcgcaaggagccagacattatgcgcaatataatc
caattttattctagagcaaaagctactgctttgttggctggtttttatgattcatgtgcc
caggttgaaattgacgagttccaaaattatgagaaagctgctggtgccttaaatgaaggt
tacaaagctttaatgaccagcagtgaccctcaggcccaggagagagtaccagcatttcag
tacaaactggaaaaggttaaacagtttcttggtattaaaagaatgtttgcaacagatggg
gattctgctatccaagaacttcaagagcttttggctgatccaaatattgaagttgcagtg
aggcagggtgatatttatgctgttattgtggagtattatgcttctaacaacaacttcaaa
tcagccttgggtgccctacaagaaatgaaaagcaagctacccaaggcaaaccctaactac
tacgtagaagcccagactctacaagcaatctcaagaacaacaggcgtgaactttggcaga
acagaaaatggaggtctggatgaaggaggaagtgaagaagagggtaatgcgagtgaggag
gaagtagttgaggaagaggaggaggatgaaaggccacaacagcattttgctcataatgga
tctgctaagtttttctag
DBGET
integrated database retrieval system
