Helianthus annuus (common sunflower): 110868670
Help
Entry
110868670 CDS
T05101
Name
(RefSeq) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
han
Helianthus annuus (common sunflower)
Pathway
han00040
Pentose and glucuronate interconversions
han01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
han00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110868670
Enzymes [BR:
han01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
110868670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
110868670
NCBI-ProteinID:
XP_021973594
LinkDB
All DBs
Position
7:132465610..132467362
Genome browser
AA seq
403 aa
AA seq
DB search
MATIFLPMILLASSLAIASSSSSSNQTPDAIVNEVHQSINASRRSLGYLSCGTGNPIDDC
WRCDSNWATNRQRLADCAIGFGKNAMGGRNGKIYVVTDPGNDNPVNPVPGTLRHAVIQDE
PLWIIFKRDMVIQLRQELVMNSFKTIDGRGVNVHIGNGPCITIHYATNIIIHGIHIHDCK
QAGNGNIRNSPHHSGWWTQSDGDGISIFASQHIWIDHCSLSNCHDGLIDAIHGSTAITIS
NNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHW
EMYAIGGSANPTVYSQGNRFLAPNTRFDKEVTKHESAPESEWKNWNWRSEGDLMLNGAYF
RESGRGAASSYARASSLSGRPSTLVASMTRAAGALNCRKGSRC
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggccaccatttttctaccaatgatcctcttggcatcttcactagccattgcttcttct
tcatcatcatcaaaccaaaccccagatgcaatagtcaatgaagtccaccagagcatcaat
gcctctaggagaagcttgggttacctctcttgcggcacgggtaacccgatcgacgactgc
tggcggtgtgactctaactgggccaccaaccgccagcggctcgctgactgcgccattggg
ttcggaaagaacgcaatgggcgggcgaaacggcaagatatatgtagtcacggatcccggg
aacgataacccggtgaaccctgttcccgggacccttcgacatgcggttattcaagatgaa
ccgttatggatcatttttaaacgtgacatggttattcagttacgtcaagaacttgttatg
aactcttttaaaactatagatggaaggggtgtgaatgtgcatattggtaatgggccatgc
attaccatacattatgctactaatattatcatacatggtattcacatacatgattgtaag
caggctggaaatggtaatattaggaactcaccacatcatagtggatggtggacacaatct
gatggtgatgggatatccatttttgcaagtcaacatatatggattgaccattgttctttg
tctaattgtcatgatgggctcattgatgccatacatggatccacagccattactatttct
aacaattacatgactcatcatgataaggtcatgcttttgggtcatagtgatagttataca
caagataaaaacatgcaagttactattgcatttaaccattttggtgaaggtcttgttcaa
agaatgccaagatgtagacatggatatttccatgtggtgaataatgactatacacattgg
gaaatgtatgctattggaggtagtgcaaaccctactgtctatagccaaggcaatagattt
ttggcacccaatacaagatttgacaaggaggtgacaaaacacgagagcgcacccgaaagt
gaatggaagaactggaattggagatcagaaggggatttgatgttaaatggtgcgtatttt
agggaatcgggtagaggtgctgcttcatcttatgcaagagcgtcgagtttaagtggcaga
ccatctacactcgtggcgtcaatgactcgggcagccggggcactcaattgcagaaaagga
tcacgatgttaa
DBGET
integrated database retrieval system
