Helianthus annuus (common sunflower): 110877799
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Entry
110877799 CDS
T05101
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
han
Helianthus annuus (common sunflower)
Pathway
han00040
Pentose and glucuronate interconversions
han01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
han00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110877799
Enzymes [BR:
han01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
110877799
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
110877799
NCBI-ProteinID:
XP_021981698
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Position
9:88968054..88972053
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AA seq
489 aa
AA seq
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MHPPITYILLFCLLTSLLSVIKATLNLSLPYQHPNPEVVVQEVHRRINVSIQHRRAMLDI
GGGCITGNPIDDCWKCDPNWGTDRQRLADCGIGFGRYALGGKGGQYYVVTDSSDHDTVNP
TPGTLRHAVLQTEPLWIVFASSMLIKLKHELIINSFKTIDGRGVNVDITGGGCITIQYVT
NVIIHNIRIFNCKPSGNAMIRSSPTHVGRRGLSDGDGISISGSRNIWIDHCSLSHCTDGL
IDAILGSTAITISNNYFTYHNEVMLMGHDDAYLPDKGMQVTFAFNHYGKGLVQRMPRCRH
GYFHVVNNDFTEWKMYAIGGSANPTINSQGNRYIAPPDPNAKEVTKRVDANEKNWVGWNW
RTEGDLMENGAFFVPSGEDLNAMYAKATSVDPKSAFLVDQLTMNAGVFGAPRDDVGTVSF
GNGPITTGGGEGRNTGNHDDDDYFGITFGSGTSAKLAPPTTLFSISLIFLVLYFNIVTIN
GGRFFMLLL
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgcatcctccaatcacctacattctcctgttctgccttttaacctctctcctatctgtc
atcaaggccactcttaatctttctcttccttatcaacaccctaatcctgaagttgttgtt
caagaagttcataggagaataaatgtatctatccaacatagaagagcaatgctcgacatc
ggtggcggttgtatcaccggaaacccgatcgacgattgctggaaatgcgacccgaattgg
ggtaccgaccgccaacgcctagccgactgcggcatcggcttcgggcggtacgcgttaggc
ggcaaaggagggcagtactacgtggtaaccgactcctccgaccacgacaccgtgaaccca
accccaggcaccctccgccacgccgtcttacaaaccgaaccattatggatcgttttcgct
tcgagcatgctgatcaaactcaaacacgagctaatcatcaacagcttcaagaccatagac
ggtcgcggggtcaacgtggacatcaccggaggcgggtgcatcaccatccaatatgttact
aatgttattatccataatattcgtatcttcaactgtaaaccgtccggtaacgccatgatc
cgatctagtccgacccatgttggccggagagggttatcggacggtgacggaatatcgatt
tccgggtcaagaaacatatggattgatcactgttctttatctcattgtacggatggtttg
attgatgcaattttgggatcaacggctattacaatttcaaacaattattttacgtatcat
aatgaagttatgcttatgggtcatgatgatgcatatttgccggataaaggaatgcaggtt
acgtttgcatttaatcattatgggaagggtttggtgcaaagaatgccgaggtgtagacat
gggtattttcatgtagtgaacaacgattttactgaatggaagatgtatgcgattggtggg
agtgcgaatcccacgattaatagtcagggtaaccgttatatagcgccacccgatcctaat
gcaaaggaggttacaaagcgtgtggatgcaaatgagaagaattgggtagggtggaattgg
aggaccgaaggagacttgatggaaaatggtgcgttctttgtgccatccggtgaagaccta
aacgctatgtatgcaaaggcgactagtgttgatcctaaatcggccttccttgtagatcaa
ctaacgatgaacgcaggtgtctttggtgcgcctagggatgatgttgggaccgtgtcattc
ggtaacggcccgatcaccacaggaggtggtgaaggcaggaatactggcaaccatgatgac
gatgactactttggaattacgtttggtagcggcacgagcgcaaaattagcaccgcccacc
actctcttttcgatttcactaattttcttagttttgtactttaacatcgtcaccatcaac
ggtggtcgtttctttatgttattattgtag
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