Helianthus annuus (common sunflower): 110890725
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Entry
110890725 CDS
T05101
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
han
Helianthus annuus (common sunflower)
Pathway
han00040
Pentose and glucuronate interconversions
han01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
han00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110890725
Enzymes [BR:
han01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
110890725
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
110890725
NCBI-ProteinID:
XP_021994040
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Position
11:145257926..145263863
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AA seq
450 aa
AA seq
DB search
MCAMPMDVPKKPFAICSFLFLMLLIATAVHIENDSNLRTAETEKLQNQSFYDSSMAARIK
EIEALNDNAVQDPEEVVSHVEMTMRNNTERRKLGYFSCGTGNPIDDCWRCDPNWHHNRKR
LADCGIGFGRNAIGGREGRFYVVTDHRDDDPVNPRPGTLRHAVIQTAPLWIVFKRDMVIQ
LKQELIMNSFKTIDARGVNVHIANGACLTLQFITNVIIHGLHIHDCKPTGNALVRSSPSH
YGWRTRADGDAISIFGSSHIWIDHNSLSNCADGLVDAVMGSTAITISNNHFAHHNEVMLL
GHSDSYYRDKMMQVTIAYNHFGKGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSASPTI
NSQGNRYLAPNNPFAKEVTKRVDTDIHKWHGWNWRSEGDLLLNGAYFTPSGGGASASYAK
ASSLGAKSSSMVAAITANAGVLKCRRGHQC
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgcaatgccgatggatgtaccgaagaaaccgttcgccatttgttcatttctgttt
ctaatgctgttaattgctaccgctgtgcacatagaaaatgattcaaaccttaggactgcg
gaaacagagaagttgcagaaccagagcttctacgactcatcaatggcggcaagaataaag
gagattgaagctttgaatgataatgcagttcaagatccagaagaggttgtctctcatgtt
gaaatgaccatgagaaacaacaccgagagaaggaaactaggatacttctcatgtgggacg
ggtaaccctattgacgactgctggcgttgcgacccaaactggcaccacaaccgcaagcgc
ctagcagactgcggcattgggttcggacgaaacgcaatcggaggccgcgaaggtcgtttc
tatgtggtcaccgaccaccgagacgatgacccagtcaacccacggcccgggaccctacgc
cacgccgtcatacaaaccgcccccctctggatcgtgttcaaacgcgacatggtgatacaa
ctaaagcaagaacttattatgaacagctttaaaaccatcgatgcgcgcggagtgaatgtg
cacatagctaatggagcttgtttaactcttcagtttattactaatgttattattcatggg
ttgcatattcatgattgtaaaccaactggtaatgccttagttagaagctctccttcacat
tatggttggagaacaagggctgatggtgatgctatttccatttttggatctagtcatatt
tggattgatcataactctctttctaattgtgctgatgggcttgttgatgctgttatgggc
tccactgccatcactatttccaataatcattttgctcaccacaatgaggtgatgttgttg
gggcatagtgattcttattatagagacaagatgatgcaagtgactatagcatataaccat
tttggtaaaggtttaattcagagaatgccaaggtgtagacatgggtatttccatgtggtt
aacaatgactacactcactgggagatgtatgctattggtggaagtgcaagccccaccatc
aacagccaaggcaacagatatcttgcacctaataatcctttcgcaaaagaggttacaaaa
agggttgatactgatatacataaatggcatgggtggaactggagatcagaaggtgatcta
cttcttaacggtgcgtatttcactccatccgggggaggtgcatctgcaagctacgctaaa
gcgtcaagtttaggggccaaatcatctagcatggttgccgccataaccgccaacgctggt
gttctcaaatgtcgtaggggtcaccaatgctag
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