Helianthus annuus (common sunflower): 110898262
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Entry
110898262 CDS
T05101
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
han
Helianthus annuus (common sunflower)
Pathway
han00040
Pentose and glucuronate interconversions
han01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
han00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110898262
Enzymes [BR:
han01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
110898262
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Glyco_hydro_28
Motif
Other DBs
NCBI-GeneID:
110898262
NCBI-ProteinID:
XP_022000717
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Position
13:complement(77293704..77296884)
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AA seq
381 aa
AA seq
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MGNHNSGQRHHHHHHLPNHNNVEPPSQPPAYYHPPPPPSNHAPQPPPPPTNQMPLPSVPY
SHVDYSLRALAGQAEGFGRFALGGLHGPLYHVTTLSDDGPGSLRAGCRVKEPLWIVFEVS
GTIELSSYLNVSSYKTIDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHDVDGIQIK
PNSKHIWIDRCSLKDYDDGLIDITRQSTNITISRCHFSNHDKTMLIGADASHHGDRCICV
TIHHCFFDGTRQRHPRVRYAKVHLYNNYTRNWGIYAVCASVESQIFSQCNIYEAGQKKVA
FKYLTEKAPDKEEASTGCIISQGDLFMSGTQPGLLGSTATSGLFHPSQHYQTWTVVPATK
ELKNLLQRYTGWQAVPRPPGP
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggggaaccataactccggccagcgacaccaccaccaccaccacctacccaaccataat
aacgttgaaccaccatctcaaccccctgcatattaccacccacccccacccccatcaaat
cacgcaccacaacccccgcccccacccaccaaccaaatgccattaccatcagttccttac
tctcacgttgattacagtttacgagctctcgccggtcaagctgaaggattcggtcgattc
gcccttggtggacttcacggaccactttatcatgttaccactctatcagatgatgggccg
ggatcacttcgagctggatgtcgcgtaaaagagcctctatggattgtgtttgaagtttcg
ggtaccattgaactgtcgtcgtatttgaatgtttcgtcttacaagaccattgatggacgg
ggtcaaaggattaagctaacgggcaaggggcttaggcttaaagaatgtgaacatgtgatc
atatgtaacttagagtttgaaggcggtagaggacatgatgtagatggtattcaaatcaag
cccaattcgaagcacatatggattgatcggtgtagtctcaaggattatgacgatggattg
attgatattacccgtcaaagcacaaatattaccatttcccgttgtcacttttcaaaccat
gacaaaacaatgctgattggagctgatgcttcgcaccatggcgacagatgtatatgtgtc
acaattcatcattgtttctttgatgggacccgacaacggcatcctcgtgttaggtatgcc
aaagtgcatctgtataacaattacaccagaaactggggcatttatgcggtctgtgccagt
gttgaatcacagatattttcacaatgcaatatatacgaagcgggacagaaaaaagtggct
tttaaatacctcaccgagaaggcacctgacaaagaggaggcaagcacaggctgcattata
tctcagggtgacctatttatgagcggtactcaaccgggcctattgggatcgacggcaaca
agtggcttgtttcacccgagccaacactaccagacatggacggttgtacctgcaacgaag
gagctcaaaaatcttcttcagcgttatacagggtggcaggctgttccacgcccacctggc
ccataa
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