KEGG   Helianthus annuus (common sunflower): 110941648
Entry
110941648         CDS       T05101                                 
Name
(RefSeq) cleavage stimulation factor subunit 50
  KO
K14406  cleavage stimulation factor subunit 1
Organism
han  Helianthus annuus (common sunflower)
Pathway
han03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:han00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    110941648
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:han03019]
    110941648
Messenger RNA biogenesis [BR:han03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     110941648
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 WD40 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd WDR55 Beta-prop_TEP1_2nd EIF3I WD40_MABP1-WDR62_2nd WD40_Gbeta Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_WDR36-Utp21_1st Beta-prop_EML Beta-prop_EIPR1 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_Aladin NBCH_WD40 Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_NWD2_C Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_SCAP Beta-prop_NOL10_N Beta-prop_DCAF4 Ge1_WD40 Beta-prop_NUP159_NUP214 Cytochrom_D1 Beta-prop_WDR41
Other DBs
NCBI-GeneID: 110941648
NCBI-ProteinID: XP_022039006
LinkDB
Position
5:complement(167892538..167900434)
AA seq 438 aa
MDTNNLEQTLQEGKLYRYVNNLIVAHLRDHNLTQAASAVASATMTPLTVEASPNKLLELV
AKGLAVEKDETGRGLSTSALFDSTTALPTTYGSIPAPRAVSVDFSAAHDTKGSSKSFPKH
ETKHVSEHKNAARCARFSPDGRFLASGSADTSIKLFEVGKIKQMLLPEGKDGPVRPVIRT
FYDHLQPVNDVDFHPQNTILISGAKDHTIKFFDFSKTTAKRASRVIQDTHNVRSLSFHPS
GDFLLVGTDHHIPHLYDVNTFQCYLSANVQEIGVNSAINQVRYSCTGGMYVTASKDGAIR
IWDGVTSNIVRSILGAHGSAEATSASFTKDQKYVLSCGKDSSVKLWEVGTGRLVKHYLGA
THTQLRCQAIFNDTEEFVLCIDEPSNEIVIWDALSAEKVARWPSNHTGAPRWLEHSPTES
AFVSCGTDRSIRFWKETP
NT seq 1317 nt   +upstreamnt  +downstreamnt
atggataccaataatttggagcaaacattgcaagaaggtaagctttatcgatacgtaaac
aatctaattgttgctcatctcagagaccacaatctcactcaggctgcaagtgcggttgct
tctgctacaatgacaccactcaccgttgaagcttctcccaacaagcttcttgagctggtt
gccaagggtcttgcagtcgaaaaagatgaaacaggaaggggactctctacatctgcattg
tttgattcaaccacagcattaccgacaacatacgggtctataccagctccccgtgctgtt
tctgtcgattttagtgctgcacatgatacgaaaggctcctcaaaaagtttcccaaagcat
gaaaccaaacatgtttcagaacacaagaacgctgcaagatgtgcaagatttagtcctgat
ggaaggtttcttgcatcgggtagtgcagatacttcaattaaactgttcgaggtaggaaaa
atcaagcagatgctgctgccagagggaaaggatggtcctgttagacccgtcatacgaacg
ttttatgaccatctacaaccagtaaatgacgtggatttccatcctcaaaatactattttg
atatctggggccaaagatcacacgataaagttttttgacttttctaagaccactgcaaag
agagcatccagggttatccaggatacacacaatgtccggtctttatcttttcatccttct
ggagattttcttctggtaggaaccgatcatcatattccacatttgtatgacgtcaatact
ttccagtgttacctctcagcaaatgtacaagaaattggcgttaatagtgcaataaatcag
gtgagatattcatgtacaggtggcatgtatgttacagcctctaaagatggtgcgattaga
atatgggatggggtgactagtaatattgttcgatcaatacttggtgcacatggatcagct
gaagccactagtgcaagttttaccaaagatcaaaaatatgttctctcgtgtggaaaggat
tcttctgtgaagctgtgggaagttggaaccgggagattagtcaaacattatcttggagct
acacacacgcaattgcgttgccaggctatctttaacgacacagaagaatttgtattatgc
atcgacgaacctagcaatgagattgtcatctgggatgctcttagtgcagaaaaagtggca
agatggccatctaaccacacgggtgcacccaggtggctggaacactcacctactgagtcg
gctttcgtgtcatgtggtacagatcgatcaataagattttggaaggaaactccttag

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