Helianthus annuus (common sunflower): 110942228
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Entry
110942228 CDS
T05101
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
han
Helianthus annuus (common sunflower)
Pathway
han00040
Pentose and glucuronate interconversions
han01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
han00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110942228
Enzymes [BR:
han01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
110942228
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
110942228
NCBI-ProteinID:
XP_022039670
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Position
7:complement(112018169..112024825)
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AA seq
494 aa
AA seq
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MPHSHTSNTYILLFCLLTSLFSAIRATFNLTLPHQHPNPEAVVQEVQRRLNVSIYRRQTL
DNTGSSCLTGNPIDDCWRCDPNWANTRQRLADCAIGFGKSAAGGKGGQIYVVTDSSDHDV
VNPVPGTLRYGVLQPEPLWIIFSSNMVIKLKHELIVNSYKTIDGRGANVAITGNGCITLQ
YVSNVIIHNIRVYDCKPSGNTNIRSSPTHVGYRGRSDGDGISIAGSRNIWIDHCSLSHCT
DGLIDAVLGSTAITISNSYFTRHNEVMLMGHDDGYMPDKGMQVTIAFNHFGRGLIQRMPR
CRLGYFHVVNNDFTEWKMYAIGGSADPTINSQGNRYIAPPNSDSKEVTKRVDTDEGHWAG
WNWRTDGDIMVNGAFFVPSGDGLSDIYAKASSYEPKSANLVTQLTMYAGVFGGPRDDDGS
ESFTDGTITGDSASGNTGRGGGGSDGDYFGMMFGGGTVAIPLPPITMFSITLLIYITTST
NNGALFSLLLLLLL
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgcctcattctcatacttccaacacctacattttgttattttgcctcttaacatccctg
ttttctgccattagagccacttttaacctcacactccctcaccaacaccctaatcctgaa
gctgtggttcaagaagtgcaaaggagactaaatgtatcaatatacagaagacaaacccta
gacaacaccggcagcagctgcctcaccggaaacccaatcgacgactgctggcggtgcgac
ccaaactgggcgaacacccgccaacgtctcgccgactgcgcaatcgggttcggaaaatcc
gcagcaggcggcaaaggcggtcaaatctacgtagtgaccgactcatcagaccacgacgta
gttaacccagttccaggaacactccgttacggagtgttacaaccggaacccctttggata
atattctcatccaacatggtaataaaactaaaacatgaactaattgtcaacagttacaaa
actattgatggccgtggtgccaacgtggcgataacgggtaacgggtgtataacattacaa
tatgttagtaacgttattattcataacatacgtgtgtacgattgtaagccgtcggggaat
actaacatacggtcgagtccaacgcatgttgggtatagaggcagatcggacggtgatggg
atatccattgctggatcaagaaatatatggatagatcattgttcgctttcgcattgtact
gatgggttgatagatgctgtactcgggtccactgctattactatttctaatagttatttt
actcgtcacaatgaagttatgcttatgggtcatgacgatgggtacatgccggataaaggg
atgcaggttacgattgcgtttaatcattttgggagagggttgatacaaagaatgccgagg
tgtagacttgggtattttcatgtggtgaataatgattttacggagtggaagatgtatgcg
attggcgggagtgctgacccgacgattaatagccaggggaaccggtatattgcaccgccg
aattccgactctaaagaggtgactaagcgagtggacacggatgaggggcattgggcgggg
tggaattggagaacggatggtgacataatggtaaacggtgcgttctttgtgccatcgggc
gatggcttgagcgatatctacgcaaaggcgtcgagctatgagcccaagtcggctaacctt
gtgacacaactgaccatgtatgccggagtctttggtggcccaagggatgatgatgggagc
gagtcattcaccgatgggacgatcaccggagatagcgcaagcgggaacactggaagaggt
ggtggcggcagtgatggtgattattttgggatgatgtttggtggtggcacggttgcaata
ccgctaccacctattacaatgttttctattactttattgatatacataactactagcacc
aacaatggtgctttgttttcattattattattattattactatag
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