Helianthus annuus (common sunflower): 110944688
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Entry
110944688 CDS
T05101
Name
(RefSeq) serine/threonine-protein phosphatase PP1 isozyme 4-like
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110944688
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
han01009
]
110944688
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
han03021
]
110944688
03019 Messenger RNA biogenesis [BR:
han03019
]
110944688
03041 Spliceosome [BR:
han03041
]
110944688
Enzymes [BR:
han01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
110944688
Protein phosphatases and associated proteins [BR:
han01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
110944688
Transcription machinery [BR:
han03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
110944688
Messenger RNA biogenesis [BR:
han03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
110944688
Spliceosome [BR:
han03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
110944688
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
Motif
Other DBs
NCBI-GeneID:
110944688
NCBI-ProteinID:
XP_035830017
LinkDB
All DBs
Position
6:46124957..46127931
Genome browser
AA seq
161 aa
AA seq
DB search
MDYVTRFHEHTKGLLDFNNLNYSPLAWLSIVPTSKITAGSSSFDSGSSLQRPTAIPDTGL
LCDLLWSDPSKDVKGWGINDRGVSYSFGADKVSEFLTKHDLDLVCRAHQVVEDGYEFFAD
RQLVTIFSAPNYCGEFDNAGAMTSVDENLLCSFQILKKMPG
NT seq
486 nt
NT seq
+upstream
nt +downstream
nt
atggattatgtcaccagattccatgaacacacaaaaggattattggattttaataatctt
aactattcgccgttggcttggctgtcaatagtcccaacttcaaaaataaccgccggcagt
tccagttttgattcgggctctagcttgcaacggcctactgctattcccgatacgggccta
ctttgtgatctgttatggtccgatccgagcaaagatgtgaaaggatggggaataaatgat
cgaggtgtttcttacagttttggtgctgataaggtttccgagtttctaaccaaacatgat
ttggatctcgtgtgtcgtgctcaccaggttgtggaagatggttatgaattctttgctgac
aggcagctagtaactatattctcggctccaaattactgtggtgaatttgataatgctggc
gcaatgacgagtgtcgacgagaatctgctgtgttcgttccaaattctgaagaagatgccc
ggatag
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integrated database retrieval system
