Helianthus annuus (common sunflower): 4055679 Help Entry 4055679           CDS       T05101                                  Symbol rpoB, HeanCp008 Name (RefSeq) RNA polymerase beta subunit   KO K03043   DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] Organism han  Helianthus annuus (common sunflower) Pathway han03020   RNA polymerase Brite KEGG Orthology (KO) [BR:han00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     4055679 (rpoB)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:han03021]     4055679 (rpoB)    03400 DNA repair and recombination proteins [BR:han03400]     4055679 (rpoB) Enzymes [BR:han01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      4055679 (rpoB) Transcription machinery [BR:han03021]  Prokaryotic type   Bacterial type    RNA polymerase     Core subunits      4055679 (rpoB) DNA repair and recombination proteins [BR:han03400]  Prokaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase complex (RNAP)       4055679 (rpoB) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNA_pol_Rpb2_6 RNA_pol_Rpb2_2 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_1 RNA_pol_Rpb2_45 Motif Other DBs NCBI-GeneID:  4055679 NCBI-ProteinID:  YP_588104 UniProt:  Q1KXX2 A0A172W3U1 LinkDB All DBs Position Pltd:13055..16237 Genome browser AA seq 1060 aa AA seqDB search MSTIPGFNQIQFEGFCRFIDQGLAEELSKFPKIEDTNQEIDFEFFLERYQLVEPLIKERD AVYESLTYSSELYVSARLIWKNDRRRYIQEQTILIGKIPIMTSLGAFIVNGIYRIVINQI LQSPGIYYQSELNDNGISVYTGTIISDWGGRLELEIDRKARIWVRVSRQQKLSILVLLSA MGLNIREILENVCYPELFLSFLNDKKKIGSKENAILEFYQQFACVEGDPVFSESLSKDLQ KKFFQQRCELGGIGRRNMNRRLNLDIPQNNTFLLPRDILAAADRLIRIKFGMGTLDDMNH LQNKRIRSVADLLQEQFGLALVRLENMARGNIYAALKHNWTPTPQNLVNSTPLTDTYKVF FRLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTARTATFPIRDIHPSHYGRICPIDTSE GINVGLIGSLAIHARIGRWGSLESPFYQISERSKGAQMLYLSPGRDEYYMVAAGNSLALN QGIQEEQVVPARYRQEFLTIAWEQVQLRSIFAFQYFSIGASLIPFIEHNDANRALMSSNM QRQAVPLSQSEKCIVGTGLEGQAALDSGALAIAEHEGKIFYTDTDKILLSGNGDTLRIPL VMYQRSNKNTCMHQKPQVRRGKCIKKGQILAYGAATVGGELALGKNVLVAYMPWEGYNFE DAVLISERLVYEDIYTSFHIRKYEIQINQGPERVTNEIPHLEVHLLRNLDKNGIVMLGSW VETGDILVGKLTPQMVKESSYAPEDRLLRTILGMRVYTSKETCLKLPIGGRGRVIDVRWV QSSKTDETEKTESIRVYILQKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQDGRPVDM VFNPLGVPSRMNVGQIFESSLGLAGDLLDRHYRIAPFDERYEQEASRKLVFSELYEASKQ TANPWIFEPESPGKSRIFDGRTGDPFEQPVIIGKPYILKLIHQVDDKIHGRSSGRYSRLT QQPLKGRAKKGGQRVGEMEVWALEGFGVAYILQEMLTYKSDHIRARQEVLGTIIFGGRIP TPEDAPESFRLFVRELRSLALELNHFLVSEKTFQLNRKEA NT seq 3183 nt NT seq  +upstreamnt  +downstreamnt atgtccacaatacctggatttaatcagatacagtttgaaggattttgtaggttcattgat cagggtttggcagaagagctttctaagtttccaaaaattgaagatacaaatcaagaaatt gactttgaattctttttggaaagatatcaattggtagaacccctgataaaggaaagagat gctgtgtatgaatcactcacatattcttctgaattatatgtatccgcgagactcatttgg aaaaacgataggcgtaggtatatccaagaacaaacaattttgataggaaagatccctata atgacttctctgggagcttttatagtaaatggaatctatagaattgtgatcaatcaaata ttgcaaagtcccggtatttattaccagtcagaattaaacgataatggaatttcggtctat accggcaccataatatcagattggggaggaagattagaattagaaattgatagaaaagca aggatatgggttcgtgtgagtaggcaacaaaaactatctattctagttctattatcagca atggggttgaatataagagaaattctagagaatgtttgctatcctgaactatttttgtct tttctgaatgataaaaaaaaaatagggtcaaaagaaaatgctattttggaattttatcaa caatttgcttgtgtagagggagatccggtattttctgaatccttatctaaggatttacaa aaaaaattctttcaacaaagatgtgaattgggagggattggtcgacgaaatatgaatcgg agactaaaccttgatataccccagaacaatacatttttgttaccgcgagatatattggca gccgcggatcgtttgattcgaataaaatttggaatgggtacacttgacgatatgaatcat ttgcaaaataaacgtattcgttctgtagcagatcttttacaagagcaatttggattggcc ttggttcgtttagaaaatatggctcgaggaaacatatatgcagcacttaagcataactgg acaccaactcctcagaacttggtaaattcaactccattaacagatacttataaagttttt ttccgtttacacccattatctcaagttttggatcgaactaatccactgacacaaatagtt catgggagaaaattgagttatttgggcccggggggattgactgcgcgaactgctactttt ccaatacgagatattcatcctagtcactatgggcgtatttgcccaattgacacatctgaa ggaataaatgttggacttattggatccttagcaattcatgcgaggattggccgttggggg tctctagaaagtccgttttatcaaatttctgagagatcaaaaggggcacagatgctttat ttatcaccgggtagagatgaatactatatggtagcagcaggaaattctttggccttgaat cagggtattcaggaagaacaggttgttccagctcggtatcgtcaagaattcctgactatt gcatgggaacaggttcagcttcgaagtatttttgccttccaatatttttctattggagct tccctcattccttttatcgagcataatgatgcgaatcgggctttaatgagttctaatatg caacgccaagcagtccctctttctcagtccgagaagtgcattgttggaactggattggaa ggccaagcggctctagattcaggggctcttgctatagccgaacacgaaggaaagattttt tataccgatactgacaagatccttttatcaggtaatggggatactctaaggattccatta gttatgtatcaacgttccaacaaaaatacttgtatgcatcaaaaaccccaggttcggcgg ggtaaatgcattaaaaagggacaaattttagcgtatggtgctgctacagttggtggcgaa ctcgctttggggaaaaacgtattagtagcttatatgccatgggaaggttacaattttgaa gatgcagtactcattagcgagcgcttagtatatgaagatatttatacttcttttcacata cgtaaatatgaaattcagattaaccaaggccccgaaagggtcactaatgaaataccgcat ttagaagtccatttactccgaaatttagacaaaaatggaattgtaatgctgggatcttgg gtggaaacaggtgatattttagtaggtaaattaacgccccaaatggtgaaagaatcatcg tatgccccggaagatagactgttacgaaccatacttggcatgcgggtatatacttcaaaa gaaacttgtctaaaactacctataggcggtaggggtcgggttattgatgtgagatgggtc cagagttctaagacagatgagacagagaaaacagaaagtattcgtgtatatattttacag aaacgtgaaataaaagtaggtgataaagtagctggaagacatggaaataagggtatcatt tcaaaaattttacctagacaagatatgccttatttgcaagatggaagacctgttgatatg gtcttcaatccattaggagtaccttcgcgaatgaatgtaggacaaatatttgaatcttcg ctcgggttagcgggggatttgctagacagacattatcgaatagcgccttttgatgagaga tatgaacaagaagcttcgagaaaactggtgttttctgagttatatgaagccagtaagcaa acagcgaatccatggatatttgaacccgagtctccaggaaaaagcagaatatttgatgga agaacgggggatccttttgaacaacctgttataataggaaagccttatatcttgaaatta attcatcaagttgatgataaaatccatgggcgttccagcgggcgttattcacgtcttaca caacaaccccttaaaggaagggccaaaaaaggggggcagcgggtaggagaaatggaggtt tgggctttagaagggtttggcgttgcttatattttacaagaaatgcttacttataaatct gatcatattagagctcgccaggaagtacttggtactataatctttggaggaagaataccg actcctgaggatgctccagaatcttttcggttgttcgttcgagaactacgatctttagct ctggaactgaatcattttcttgtatctgagaagactttccagcttaataggaaggaagct taa

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