Halobacterium sp. NMX12-1: ABSL23_00390
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Entry
ABSL23_00390 CDS
T10641
Name
(GenBank) ribosome biogenesis/translation initiation ATPase RLI
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
hanx Halobacterium sp. NMX12-1
Brite
KEGG Orthology (KO) [BR:
hanx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hanx03009
]
ABSL23_00390
Ribosome biogenesis [BR:
hanx03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
ABSL23_00390
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_16
AAA_22
AAA
AAA_30
Motif
Other DBs
NCBI-ProteinID:
XCF15104
UniProt:
A0AAU8CA34
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All DBs
Position
pNMX12-1_234:65017..66822
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AA seq
601 aa
AA seq
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MTTPSDRQSEEYIAVIDQDEVTDEVRNIAVNYDPLNRSGHEGFHVTEDGELHIDDAKVMA
EHRLVEKKIPNDAVQIVPLPAETGQLVHQYGENGFRLYELPALRDGAVVGLLGRNGIGKT
TALRVLAGDLVPNFGESSGGDWDHAVASFRGTTLQTHLERLRDGTVTTALKRQRVDRLAD
QAADTVHALLASRPTDADELLDDLDLRPILDRPLTELSGGERQRVAIAATLLEDADLYLF
DEPSSFLDVAQRATVARVVHDRIRDTDASALVVEHDLATLDLLTDSIHVVYGESGSFGVV
SQQLSPRAGINQFLDGHLTEENLRIRRRSIEFPSATDRGVQHRAVALEYPALEKTFDAFS
LSVDAGRIHAGECVGVVGENALGKTTFVKLLAGVLESDDGTVSDDVTVSDDVTVSYKPQY
VSPDSQGTVREQFREVADLYSEEFARRIRDPFDVEALYDRTLDSLSGGELQRVGVALCLA
RDADAYLVDEPSAFLDVDRRVSTADAIRQFSDRTDRPVLVVDHDLFVVDRVADRLIVFEG
EPGERGYANSPQPMQEGMNAFLSALGVTFRRDERTGRPRVNKPGSQLDREQKASGEYYYG
R
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgaccacaccgtccgaccggcagtccgaggaatacatcgcggtcatcgaccaggacgag
gtgaccgacgaggtgcggaacatcgctgtcaactacgacccgctgaaccggtccggccac
gaggggttccacgtcaccgaggacggcgaactccacatcgacgacgcgaaggtgatggcc
gagcacaggctcgtcgagaagaagatccccaacgacgcggtccagatcgttcccctgccg
gccgagaccgggcagctcgtccaccagtacggcgagaacgggttccgactgtacgaactg
ccggcgctccgtgacggcgccgtcgtcggactgctcggccggaacggcatcgggaagacc
actgcactgcgcgtgctcgccggcgacctcgtcccgaacttcggtgagtcgtcgggcggc
gactgggaccacgccgtcgcgtcgttccgcgggacgaccctccagacccacctcgagcgg
ctccgcgacgggacagtcacgacggcactcaagcgccagcgcgtcgacagactcgccgat
caggccgccgacactgtccacgcactgctggccagccggccgacagacgccgacgagctc
ctcgacgacctcgacctccgaccgatactggaccgaccgctcacagagctctcaggaggc
gagcgacagcgcgtcgccatcgccgcgacgctgctcgaggacgccgacctctacctgttc
gacgagccatcgtcgtttctcgacgtcgcccagcgtgcgaccgtcgcccgcgtcgtccac
gaccgcatccgggacacggacgcgtcggcgctcgtcgtcgaacacgacctcgcgacgctg
gacctgctcacggacagcatccacgtcgtctacggggagtccggcagtttcggcgtcgtc
tcccagcagctgtccccgcgagcgggtatcaaccagttcctcgatggccacctgaccgaa
gagaacctccgcatccgacgccggtcgatcgaattcccgtcggcgaccgaccgcggtgtc
cagcaccgcgccgtcgcgctcgaataccccgcgctcgagaagacgttcgacgcgttctcg
ctgtcggtcgatgcgggccggattcacgccggcgaatgcgtcggcgtcgtcggcgagaac
gcgctcggcaagacgacgttcgtgaaactcctggcgggcgtcctcgaatccgacgacggg
accgtctccgacgacgtgaccgtctccgacgacgtgaccgtctcgtacaagccacagtac
gtcagtccggacagtcaggggacggtccgcgaacagttccgggaagtcgcggatctctac
tcggaggagttcgcgagacggatccgggacccgttcgacgtcgaagcgctgtacgaccgg
acgctggactcgctatccggcggggaactccagcgggtcggcgtcgcgctgtgtctcgct
cgtgacgccgacgcgtacctcgtggacgagccgtcggcgttcctcgacgtcgaccggcgc
gtgtcgaccgctgacgcgatccggcagttcagcgaccggaccgaccggccggtgctggtc
gtcgaccacgacctcttcgtggtcgaccgcgtcgccgaccgtctgatcgttttcgagggc
gagcctggcgagcgcggctacgcgaacagtccgcagccgatgcaggaggggatgaacgca
ttcctctcggcgctcggcgtcacgttccgccgcgatgagcgcaccggtcgaccgcgcgtg
aacaagcccggcagccaactcgacagggaacagaaagccagcggcgagtactactacggc
aggtga
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