Halomonas sp. NyZ770: LG409_01080
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Entry
LG409_01080 CDS
T10914
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
hany Halomonas sp. NyZ770
Pathway
hany03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hany00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LG409_01080 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hany03021
]
LG409_01080 (rpoA)
03400 DNA repair and recombination proteins [BR:
hany03400
]
LG409_01080 (rpoA)
Enzymes [BR:
hany01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LG409_01080 (rpoA)
Transcription machinery [BR:
hany03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LG409_01080 (rpoA)
DNA repair and recombination proteins [BR:
hany03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LG409_01080 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_XRCC3_RpoA
Acyl-CoA-dh_C
Motif
Other DBs
NCBI-ProteinID:
UDM07543
LinkDB
All DBs
Position
225060..226055
Genome browser
AA seq
331 aa
AA seq
DB search
MQRSVTEFLRPRDIKVEEISAHHAKIVLEPFERGFGHTLGNALRRILLSSMPGAAVVEAE
ITGVEHEYSALEGVQEDVIEILLNLKDVAIKMHSRDEAVLSLNKQGPAVVTAGDIALDHS
VEIVNPDHVIAHVNEGAELKIQLKVALGRGYEPADARGSDEETRAIGRLQLDATFSPVRR
VSYSVEAARVEQRTDLDKLIIDLETDGTLDPEEAIRRSATILQEQLAAFVDLEADKEQEV
EEEEDHVDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLNE
IKDVLAARGLSLGMRLENWPPASLKDDKASA
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgttcagtgacagagtttcttcgcccccgcgacatcaaggtcgaagagatcagc
gcacatcatgccaaaatcgttctcgaaccgttcgagcgcggctttggtcacaccctgggg
aatgcacttcgtcgcattctgctttcatccatgcccggcgctgccgtggtagaggctgaa
atcaccggtgtagagcacgaatacagtgcgctcgaaggggtgcaggaagatgtcatcgaa
atcctcctgaacttgaaagatgttgcgatcaagatgcacagccgcgatgaggcggtgctc
tcgctgaacaagcagggcccagccgtcgtcaccgctggcgacattgcgcttgatcatagc
gtcgaaatcgtcaacccggaccacgtcattgcacacgtcaatgaaggtgccgagctgaaa
attcagcttaaggtagcgctgggtcgtggttacgaaccggctgacgctcgtggctctgat
gaagagacccgtgctattggccgcctgcagctggatgccaccttcagccctgttcgccgt
gtttcctattcggtcgaagccgctcgtgtcgagcagcgtaccgacctcgataagctgatt
atcgacctggaaaccgacggtacactggatccggaagaggctatccgtcgcagtgcgacc
attctgcaagagcagctggccgccttcgtcgacctggaagctgacaaagagcaggaagtc
gaagaggaagaggatcacgttgatccgatcctattgcgccccgtagacgatctcgagttg
accgttcgcagcgccaactgcctgaaagccgagaatatctactacatcggtgatctgatc
cagcgcacggaagtggagctgttgaagaccccgaacctcggtaagaagtccttgaatgaa
atcaaggatgtattggcagcgcgcggcttgtccctcggtatgcggctggaaaattggcca
cccgctagcctgaaggacgacaaggcctccgcgtaa
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