Glaesserella parasuis SH0165: HAPS_1520
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Entry
HAPS_1520 CDS
T00825
Symbol
gidA
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
hap
Glaesserella parasuis SH0165
Brite
KEGG Orthology (KO) [BR:
hap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hap03016
]
HAPS_1520 (gidA)
03036 Chromosome and associated proteins [BR:
hap03036
]
HAPS_1520 (gidA)
Transfer RNA biogenesis [BR:
hap03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
HAPS_1520 (gidA)
Prokaryotic type
HAPS_1520 (gidA)
Chromosome and associated proteins [BR:
hap03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
HAPS_1520 (gidA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
SAM_GIDA_C
GIDA_C_1st
MarR_2
NAD_binding_9
Motif
Other DBs
NCBI-ProteinID:
ACL33076
UniProt:
B8F6X4
LinkDB
All DBs
Position
complement(1500967..1502778)
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AA seq
603 aa
AA seq
DB search
MGLKTLLLTHNVDTLGQMSCNPAIGGIGKGHLVKEIDAMGGLMATATDKAGIQFRTLNSS
KGPAVRATRAQADRVLYRQAVRTALENQPNLDIFQQEVVDILVENNRAVGAVTKMGLTFK
AKSVILTAGTFLAGKIHIGLDNYAGGRAGDPAATMLADRLRDLNLRVDRLKTGTPPRLDA
RTINFDVLAKQHGDDVLPVMSFMGSVEQHPRQIPCYITHTNEQTHDLIRNSLDRSPMYTG
IIEGIGPRYCPSIEDKVMRFSDRNSHQIYLEPEGLTTIEVYPNGISTSLPFDVQIGIVNS
MKGLENTRIIKPGYAIEYDYFDPRDLKPTLETKAIDGLFFAGQINGTTGYEEAAAQGLLA
GINAGLQVQGKEAWFPTRDLAYTGVLVDDLCTLGTKEPYRVFTSRAEYRLLLREDNADAR
LTPIAHQFGLIDEARWMRFNEKMENIEKEKARLKQTWAHLQMANLVEVNALLNSPLAREA
SGEDLIRRPEVTYEALTQIAPFAPAIEDKEAAEQVEISIKYQGYIEHQQQEIERHKRHEN
TQIPAEFDYDKVESLSNEVRAKLIQHRPVSIGQASRISGITPAAISILLVNLKKQGMLKR
GEL
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgggtttaaaaaccttacttttaacacacaatgtagataccttaggacaaatgtcttgt
aatccagcgattggtgggatcggcaaaggacatttagtcaaagaaattgatgcgatgggt
ggtttaatggcaacggcaacggataaagcagggatccaattccgcaccttaaacagttca
aaaggccctgctgttcgagccactcgtgcgcaagcagaccgtgtactttaccgccaagcg
gtgcgtactgcattagaaaatcagccaaatttagatattttccaacaagaagtcgtggat
attttggttgaaaataaccgtgcggttggtgcagtaactaaaatgggtttaacctttaaa
gcgaaatcagtgattttaaccgcaggtactttcttggcgggtaagatccatattggttta
gataactacgcaggcggacgtgcaggtgatcctgctgcaacaatgttggctgatcgttta
cgcgatcttaatttgcgtgttgatcgattaaaaacaggtacgccaccacgtttagatgct
cgcacgatcaattttgatgtattggcaaaacaacacggcgatgacgtattgcctgtaatg
tcatttatgggatccgttgagcaacaccctcgtcaaattccgtgttatatcactcacact
aacgaacaaacccacgatttgatccgtaatagtttagatcgtagcccgatgtatacgggg
attatcgaagggatcggtcctcgctattgtccgtcgatcgaagataaagtgatgcgtttt
agtgatcgcaatagccaccagatctaccttgaaccagaaggcttaaccaccattgaagtc
tatccaaacggtatttcaaccagtctgccgtttgatgtacaaatagggattgtaaactca
atgaaagggttggaaaacacccgtattatcaaaccgggctatgcaattgagtacgactat
ttcgaccctcgtgatctgaaaccgacccttgaaactaaagcgattgacggcttattcttt
gccggacaaattaacggcacaacgggttacgaagaagccgctgcacaaggtttattggca
gggattaacgccggtttacaggtacagggaaaagaagcgtggttcccaacccgtgattta
gcttacactggcgtattggtagatgatctctgcactttaggtactaaagaaccgtatcgt
gtatttacttcccgagcggaatatcgcttgttgttgcgtgaagacaacgctgatgctcgt
ctaacgccgattgctcatcaatttggtttaattgatgaagctcgttggatgcgttttaac
gagaagatggaaaacatcgaaaaagagaaagctcgcttaaaacaaacctgggcacacttg
caaatggcaaatcttgtagaagtgaatgcattattaaatagcccacttgcccgtgaagca
agcggtgaagatttaattcgccgtcctgaagtgacttacgaagccttaactcaaattgcg
ccttttgcgccagcgattgaagataaagaagccgctgagcaagtggaaatttcgattaaa
tatcaaggctatatcgaacatcaacaacaagagatcgaacgccataaacgccacgaaaac
acgcaaattccagctgaatttgattatgacaaagtggaaagcctatctaacgaagtgcga
gcgaagctaatacaacaccgcccggtgtctatcggacaagccagtcgtatttcaggcatt
accccagcggcgatttcaattttgctggtgaatttgaaaaagcaaggcatgttgaaaaga
ggtgagttgtaa
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