Haloplanus rubicundus CBA1112: DU484_11705
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Entry
DU484_11705 CDS
T05557
Name
(GenBank) transcription initiation factor IIB 2
KO
K03124
transcription initiation factor TFIIB
Organism
haq
Haloplanus rubicundus CBA1112
Pathway
haq03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
haq00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
DU484_11705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haq03021
]
DU484_11705
Transcription machinery [BR:
haq03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
DU484_11705
Prokaryotic type
Archaeal type
TFB
DU484_11705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
TF_Zn_Ribbon
Trm112p
Anti-TRAP
Sigma70_r4
LysW-like_globular
zf-ribbon_3
Cyclin_N
HTH_Tnp_ISL3
UMPH-1
OrfB_Zn_ribbon
Zn_Tnp_IS1595
DZR
DZR_2
A2L_zn_ribbon
UPF0547
Auto_anti-p27
TrmB
YjdM_Zn_Ribbon
Motif
Other DBs
NCBI-ProteinID:
AXG10453
UniProt:
A0A345E4G1
LinkDB
All DBs
Position
2099315..2100301
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AA seq
328 aa
AA seq
DB search
MTDSVRGYTTERSRARESEDETESTEEGEQLRCPECGGQLATDTEHGETVCADCGLVVEE
DEIDHGPEWRAFDSKEKDQKSRVGAPTTQMMHDKGLSTNIGWQDKDAYGKTLSSRQREKM
QRLRTWNERFRTRDSKERNLKQALGEIDRMASALGLPENVRETASVIYRRALSDDLLPGR
SIEGVATSALYAAARQAGTPRSLDEIATVSRVDKDEIARTYRYVVRELGLEIQPADPEQY
VPRFASELDLSDESERRARDLLKTAKDQGVHSGKSPVGLAAAAIYAAALLTNEKVTQSEV
SEVANISEVTIRNRYHELLEAEEQIQVP
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatagcgtacgcggttacacgaccgagcgctcgcgcgcgcgcgagagcgaagac
gagaccgagagcaccgaggagggcgaacagcttcgctgtccggagtgcggtggacagctc
gctacggacaccgaacacggcgaaaccgtctgtgccgactgtggcctggtcgtcgaggag
gacgaaatcgaccacggccccgagtggcgcgccttcgactccaaggagaaagaccagaaa
tcgcgagtcggcgcgccgacgacccagatgatgcacgacaaggggctgtcgacgaacatc
ggctggcaggacaaggacgcctacggcaagacgctctcctcgcgccagcgcgagaagatg
cagcgtctccgcacctggaacgagcggttccggacccgggactcgaaggagcggaacctg
aagcaggcactcggcgaaatcgaccggatggcctccgcgctcggtctccccgagaacgtc
cgcgagacggcgtcggtcatctaccgacgcgcgctctcggacgacctgctccccggccgc
tccatcgagggtgtcgccacgagcgccctctacgccgccgcgcgacaggcgggcacgccc
cgctcactcgacgaaatcgccaccgtctcccgcgtcgacaaggacgaaatcgcgcggacg
taccgctacgtcgtccgcgaactcggcctcgaaatccagcccgcggaccccgagcagtac
gtcccccgcttcgcctccgaactcgacctctcggacgagtcggagcgacgggcgcgtgac
ctgctgaagacggcgaaagatcagggcgtccacagcggcaagagtccggtcggcctcgcg
gccgccgccatctacgccgcggccctcctcacgaacgagaaggtgacccagagcgaagtg
agcgaggtggcgaacatctccgaggtgacgattcgcaaccgctaccacgaactgctcgaa
gccgaagagcagattcaggttccctga
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