Halioxenophilus aromaticivorans: R50071_16940
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Entry
R50071_16940 CDS
T10756
Name
(GenBank) DNA-3-methyladenine glycosylase 2
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
haro Halioxenophilus aromaticivorans
Pathway
haro03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
haro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
R50071_16940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
haro03000
]
R50071_16940
03400 DNA repair and recombination proteins [BR:
haro03400
]
R50071_16940
Enzymes [BR:
haro01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
R50071_16940
Transcription factors [BR:
haro03000
]
Prokaryotic type
Helix-turn-helix
AraC family
R50071_16940
DNA repair and recombination proteins [BR:
haro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
R50071_16940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ada_Zn_binding
AlkA_N
HTH_18
HTH_AraC
HhH-GPD
DUF732
Motif
Other DBs
NCBI-ProteinID:
BFM06490
LinkDB
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Position
complement(1943529..1944965)
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AA seq
478 aa
AA seq
DB search
MKIPQPIPEHLLKAFYARDRRYDGVFFTGVTSTGVYCRPVCRARKPKRENCVFFNTAAEA
ELADFRPCLLCRPELAPGVSGVAPNSPFVEPEDQTLGERQQRRNSKQAFGVTPKQWQRTQ
NLLLAKRLLTDTEMSVTDVAFAAGFSSVRRFNDVFKQRYQLTPTGLRKTKAQNPEQKDWL
RLTLNYRPPYRWQELLAFLASRQIYGVEHITDHSFARSLALVNRDGSTVHGEIKVTHNEA
KHQLALAVSAGLHPVIATVIDQAKQVFDTQAQPQLIAENLMAGKIPGNFSDKGLGLRVPG
SFAGFELAVRAVLGQQITVKAAATLSRRFCDRFCQPYQGIQPELTRLPVSAHVIAHAHVD
DIASLGIIARRAEAIIAIAQQVCSGQLVLAPGADAEAVINQLQAIKGIGPWTANYVALRA
LAWPDAFPKEDIVLRKALAGADAITRTAKQAEALSQPWRPWRSYACLYLWKIAHDQSV
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatacctcagccaataccagaacacttgcttaaggccttttacgcccgtgatcgg
cgctatgatggggtgttttttacgggcgtgacttccaccggcgtgtattgccggccggtg
tgccgggcgcgcaaacccaagcgggagaattgcgtgttttttaacacggcggcggaggca
gagctggcggattttcggccctgcttgctgtgccggccggagctggcacctggggtttct
ggcgttgcgccaaactcgccatttgtagagccggaagatcaaaccctgggggagcgccag
cagcgccgtaacagcaagcaagcctttggcgttactccaaagcagtggcaacgcacgcag
aacttactgctagcaaaacggctgttaaccgacacggaaatgagcgtaaccgacgttgcc
tttgccgccggctttagcagtgtgcggcgctttaacgatgtgtttaaacaacgctaccaa
cttacccccacgggcctgcgtaaaaccaaggcccaaaaccccgagcaaaaagattggttg
cggctaacgcttaattatcggccgccctatcgctggcaggaattactggcgtttttagcc
agccgccaaatctacggcgtagaacatattaccgaccacagttttgcccgcagccttgcg
ctggttaaccgcgatggcagcaccgtgcacggtgaaattaaggttacccataacgaagcc
aagcaccaattggcgctggccgttagcgccgggttacacccggttattgccacggtaata
gaccaggccaagcaggtgttcgacacccaagcccagccgcaattgatcgccgagaattta
atggccggtaaaatccccggtaattttagcgataagggtttaggcctgcgggtaccgggc
agttttgccggctttgagctggccgtgcgggctgttttgggccagcaaattacggtaaaa
gccgctgctactctgtctcgccggttttgcgaccgcttctgccaaccctaccaaggtatt
caaccggagctcacccgcctgccggttagcgcccatgtgattgcccacgcccacgtggac
gatatcgcttcactgggcattattgcccgccgcgccgaggctattatcgccattgcccag
caggtgtgttctggccaactggtattggcccccggagccgacgccgaggcggtgataaac
caattacaagccattaagggcattggcccgtggacggcaaactacgttgccctgcgcgcc
ctggcgtggccggatgccttccccaaggaagacattgtgttacgcaaggccctggccggc
gccgatgccattacccgaacggccaaacaagccgaagcattgtctcaaccgtggcgcccc
tggcgcagctacgcctgtttatatttgtggaaaatagcccatgaccaatctgtttaa
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