Haliotis asinina (tropical abalone): 137258918
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Entry
137258918 CDS
T10448
Name
(RefSeq) CCR4-NOT transcription complex subunit 1-like isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
hasi Haliotis asinina (tropical abalone)
Pathway
hasi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hasi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
137258918
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hasi03019
]
137258918
Messenger RNA biogenesis [BR:
hasi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
137258918
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
137258918
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
137258918
NCBI-ProteinID:
XP_067652713
LinkDB
All DBs
Position
12:complement(4683505..4735228)
Genome browser
AA seq
2594 aa
AA seq
DB search
MNLDSLSFALAEISYSVANLTKKNFKANVSEISHLVAQHGAEADRHLFRCLFSHVDFSGD
GKSSGKDFHQFPFQTQFLIQECGSLFSKSNFVSTLCYAIDNPLHHQKSLKPSSQLFPQLS
KVLRLTRVQEVVFGLALLNSVSPDSRTYATQYIKQKLPDLLRSYVDADVTSRQEGGLQDV
CIEVLHLLLTHLERGKDHFGIGNEQKEAFLKTLRRDFPRERAPAVLAPLLFPNTEDIPIE
KLADTLSMPKSMMDASLADMILEAGYSCTSTVEECRNHLMQFGFRELTPTSVARVLGMMS
HTPTGLGESQPAPTSVAVGSGWSDKDRIDTPGVTTWNVEIFVQVVKDLAPLLNWKEVVSQ
LDHKGFYVNNKKGLKLLMEGLFRGLQDIFPVEYIFKPWSNTEGQLSFIIQSLRNPDVFSF
ADYPGDTVVIDILKSTPNDEDREVATWKSLNLVESLLRLAEAGHYQAVWDMFKYPSQKCP
DMLVLALLQTTPTWNTIKQELIATLMPIFLGSHANSAVVLHYAWHHQGHSSTIRTLIMHS
MAEWYMRGEPHDQTRLSRILDVAQDLKALSMLLNATPFAFVIDLACLASRREYLKLDKWL
TDKIGEHKEPFIQACVTFLKRRCPQLVGAPVKEELPQMKSQQLPPDTIATMLTCLKTWAN
QVSQELSESIATMFTNASLILNRNRQAPPGVVGPKQPPQQPPANFTPSGMVNPMDPLSNI
GNVLAPPIQSAVGSGASSAFPTSGITSAFPTTGASSAFPSSASSAFPSTGLSSGFPTSVG
SSGFPTSVGTSAFPTSVGSSAFPTSAGSSAFPTSAGSSTFQTSAGSSAFPTSGGSSAFPT
SGGSSAFPTSVGSSAFPTSVGSSAFPTSVGSSGFPSSGSTPFPSSGSTPFPSSGSTPFPS
GSTPFPSGSTPFPSGSTPFPTGGSSGFPQSLAGSVAPGSPSKGFTGISQQNNTAFNPIQS
LSSQFQNIGFQTPISTAMGPPRNPVNSLANLSAQVAVKQGASSADRISTRPTGTGPPGDM
STIFPEMTQQFSKEVEDKANSYFQQIYNQPPHPTMSIDEVLEMLKRFKDSQNKIERDVFA
CMLRNLFEEYRFFPQYPERELHTTAVLFGGIIEQGIVTYWTLGIALRYILEALRKPYGSK
MYYFGIAALDRFKTRLKDYPQYCQHLAAIQHFQQFPHHLIEFVDFGARSQEPPPMAQTSG
ALTPTMGGTPVPVQPANNPVARTTEGAVSGGGTAASVVSSAGAGSGTTTVNTTSTRPTPG
PAFSKPSIATATNIDTLLAGQGKEEIAVPPESLQDKVFFIFNNLSLANMQPKGEELKEQV
GEEYMPWCSQYLVMKRASIEPNFHTLYSSFIDVLQIPNMTQTVIKETFRNIKVLLRSDKG
VANFSDRTLLKNLGHWLGMLTLGKNKPILQIDIDVKALLYEAYQKGAQELLYVVPFSAKV
LESCSKSKVFRPPNPWTMAIMNVLAELHMEPDLKLNLKFEIEVLCKTLGLDINELKPTNY
LKDPMRLPTIECQLSAPKPQIGTPLPPAEESVVPSLTSMSIPPPIVTSVTTMSTPTSTAP
VSTPNLPPQPTYSFHDVNASSFTGLAQHIIINDQIALLHQNPQLKQYVRPAIERSVQELL
PPVVERSIKIALTTCEQIVRKDFALDPEEMRMRSAAHYMVRNITAGLALITCREPLFISI
NNNLKNAFMATLRGATQAQKTLIEEAATLVAQDNAELACAFIQKTAVERAIPEMDKRLAT
EFDLRKHARSEGRRYCDPIVLPYQAERMPDQIRLKVGGVTPQQIAVYDEFARNIPGFLPL
TDATFPPGISKPTPSYAPDEITMIYEKIARDIEQHLQQMMGIPAGSPMGSQLHSLLEAVL
LARNSREIVTAIALLQKAVEGLLDQYSMNSLTNTDQEMLLRFRECHLVVLKGLQDARAYG
PQWVNKEVTRCLIQCRDEFKYNIDAVDCLIRSGLVNLQQYDVYLSQLMENGLNHVAVSFS
MQLVQRFCIDDKHNSSVSEADFYNTIEALGAIASRSRQHPEGLSTLIEIIRQNSDGGLLD
RTPGGPTSMMQSGISQAREFDDPPGLNEKTEYLLREWVNMYHSPAAGRDSTKAFSAFVQQ
VMHQQGILKTDDLITRFFRLCTEMCVDLCYRALSEQTHTSPTLIRAKCFHTLDAFVRLIA
LLVKHSGDTTNTVTKINLLNKVLGIVAGVLLQDHEVRYTEFQQLPYHRIFIMLFIELNAP
EPILESINFQVLAAFCHVFHILRPGKAPGFAYAWLELVSHRVFIGRLLALTPQQRGWGMY
AQLLIDLFRFLSPFLRNAELTKPTQLLYRGTLRVLLVLLHDFPEFLCDYHYAFCDVIPPN
CIQMRNLILSAFPRNMRLPDPFTPNLKVDTLPDITHPPRILTNFVNMIQPASFKKDLDSY
LKTRTPISFLSELRSSLQSNEPGCHYNIPLINALVLYVGTQAIQFIHTKGQTPAISTIAP
SSHMDIFQNLAVNLDTEGRYLFLTAIANQLRYPNSHTHYFSCTLLYLFVQANNEQIQEQI
TRVLLERLIVNRPHPWGLLITFIELIKNSTFKFWSHEFVHCAPEIDKLFESVARSCMQPK
QSSNSREPETAEVH
NT seq
7785 nt
NT seq
+upstream
nt +downstream
nt
atgaatctggactcactttcatttgcgttggcagaaatcagttattccgttgccaatcta
acaaagaaaaatttcaaagcaaacgtttctgagatatcacatcttgtcgcccagcacgga
gcggaggctgataggcatctgttccggtgcctcttctctcacgttgatttcagtggtgat
ggtaaaagtagtggcaaggactttcaccagtttcccttccagactcagtttctgattcaa
gagtgtgggtcactttttagtaaatccaacttcgtgtcaacattgtgctacgccatcgac
aatcctctacaccaccaaaagagtttgaaaccgtcatcacagctgttcccccagctgagt
aaggttttaaggctcacacgtgtacaggaggttgtatttggtttggcgcttctcaactct
gtaagccctgattcccgcacatacgccacacagtacatcaagcaaaaacttcctgaccta
ctacgctcatacgtggatgcagacgtcacaagtcgacaggagggtgggcttcaggacgtc
tgcattgaagtactccacctgctactgacacacttagagcggggaaaagatcattttggt
attggcaacgaacagaaggaggcattcctgaaaacactcagaagagattttccccgagaa
cgagcaccagcagttcttgctcctttactgttccccaacactgaagacatacccatagag
aaacttgcagatacgctcagcatgcccaagtcaatgatggatgcctctctggcagacatg
atactggaagcaggatacagctgtacctctactgttgaagaatgcaggaatcatcttatg
cagtttggtttccgagagttgacacctacctcggttgcccgagtcctaggaatgatgtcc
cacacgcccacaggactgggagagtctcagccagcaccgacctcagtggctgttgggagt
ggatggtcggacaaagacagaatagacacaccaggggtaacgacttggaatgtggagatc
tttgtgcaggttgtgaaggatcttgcaccactcttgaactggaaggaggtggttagtcag
ctggatcacaaggggttctatgtgaacaacaagaaaggcctgaagctgctgatggaggga
ttgttccgaggccttcaagacatcttcccagtagagtacatcttcaagccatggagtaac
acagaaggacagttatcatttatcatacagtcattgcggaaccctgatgtgttcagtttt
gctgactacccaggggatacagttgtcattgacatcctcaaatccacacccaatgatgaa
gacagagaggttgctacttggaaatccttgaacctggtggagtcactgcttcgcctagca
gaggctgggcactaccaggcagtgtgggatatgttcaagtacccgtcccagaagtgccct
gatatgctggtccttgccctgttacaaacaacaccaacatggaacaccatcaaacaagaa
ctgatcgcaacacttatgccgattttcttgggcagccatgcaaattcagcagtggttctt
cattatgcttggcatcatcaggggcactccagtacaatcaggacactgataatgcactct
atggcagaatggtacatgagaggggagcctcatgatcagactcgactgtcacgtatattg
gatgtagcacaagatctaaaggccctctccatgctgttaaatgccaccccatttgcattt
gtgatcgacctggcatgcctcgcttcaagacgagagtacctcaaactggacaagtggttg
acagacaagatcggagaacacaaggaaccattcattcaagcctgtgtaacgttcctcaag
agacgatgtcctcaactggtcggtgcaccggtgaaggaagaactgcctcaaatgaaaagc
caacagttgccacctgatacaattgcaactatgctcacctgcttgaagacttgggccaac
caagtgtctcaagagctgtcggaatccattgcgacgatgttcaccaatgcaagtttgata
ctcaaccgcaacagacaagcgccacccggtgtagtaggcccaaagcagccaccacagcaa
cccccggcaaactttactccttcaggcatggttaacccgatggatccgctttctaacatt
ggcaacgtccttgcgccacccatacagtcagcggtaggttccggggcctcctcggccttc
ccaacaagtgggatcacgtcagccttcccaactaccggtgcatcatcagcttttccatcc
agtgcatcgtcagctttcccatctacaggactatcatctggctttcccacaagtgttgga
tcatcaggatttcccactagtgttgggacatcagcctttcctaccagtgttggttcatct
gcgtttcccacgagtgctggttcctcagctttccctacaagtgctggatcatctaccttc
cagactagtgctggctcctcggcctttccaacaagtggtggctcttcggccttcccaaca
agtggtgggtcgtcagctttcccaacaagtgtaggatcttcagctttcccaacaagtgtt
ggatcttcagcctttcccacgagtgttggatcgtctggcttcccatcaagtggttcaaca
cctttcccatctagtgggtccacgccatttccatcaagtgggtccacaccatttccgtca
gggtccacgccatttccgtcggggtccacaccgtttccgtcagggtctacaccgtttcct
acagggggatcttcaggctttcctcagtcactggctggatctgttgcaccaggctctcct
tccaaaggtttcactggaatctcgcaacagaataacacagcattcaaccccattcagtca
ttatcatcccagtttcaaaatattgggttccagacacccatttctacagccatgggtccc
ccaaggaatccggttaactctcttgccaatctgagtgcccaagtggctgtgaaacaaggg
gcatcctcagctgacaggattagcaccaggcccactggaactggaccgcctggggacatg
tctaccatcttccccgagatgactcagcagttcagcaaggaggtagaagacaaggctaac
tcatacttccagcagatctacaaccagcctcctcaccccaccatgtccattgatgaagtg
ctcgagatgctcaagagatttaaagactcacagaacaagattgaaagggatgtgtttgcc
tgcatgttgcggaacctgtttgaggagtaccgcttctttccacagtatcctgagagggag
cttcacacaacagcagtgctcttcgggggcattattgaacagggtattgttacgtactgg
acacttggcattgcattgaggtatatactggaggcgctgagaaaaccttatgggagcaag
atgtattattttggaattgcagctcttgaccgattcaaaacaagactaaaggactacccc
cagtattgtcagcacctggcagctatacagcacttccagcagtttccgcaccatctcatt
gagtttgtcgacttcggtgcccgatcccaggaacctccccctatggcacaaacatcaggg
gccctcaccccaactatgggtggaacgcctgtccctgtacagccagctaataatcccgtt
gccaggaccacagaaggagctgtgtctggaggagggactgctgcctctgtggtgtcaagc
gcgggggcggggtctggaacaactacggtcaataccaccagcaccagaccaactccagga
cctgcgttttccaagccctccatcgctactgccaccaacattgacaccctgctagctggt
caagggaaggaggagatagcagtgccaccagaatcacttcaagacaaggtcttcttcatc
tttaacaatctgtccctggcaaatatgcaaccaaagggtgaggagctgaaagaacaagta
ggagaggagtatatgccgtggtgttcccaatacctggtcatgaagagagccagcattgaa
cccaacttccacactctctactcaagcttcattgacgtcctacagataccaaacatgacc
cagactgtcatcaaggagaccttcaggaacataaaggttctgttaaggagcgacaagggt
gttgctaacttctcagatcgaacgttactgaaaaatcttggtcactggttgggaatgctc
acactaggaaaaaacaaacccatcttacagattgacattgatgtgaaagccctgttgtat
gaagcttatcagaagggtgcgcaggagttactctacgttgtccccttcagtgctaaagtg
ctagagtcatgctccaagagcaaggtgtttcgcccacccaatccctggaccatggccatc
atgaatgtgctagctgagctccacatggagcccgacctcaaacttaacctcaagtttgaa
attgaagtgctatgtaaaacactggggcttgatattaatgaactaaagcccacaaattat
ttaaaagacccaatgcgactaccaacaatcgagtgccagttgtctgcacccaaacctcag
atcggtacgccattgccgccggcagaagaatctgttgtgcccagcctcacttccatgtct
atccctccacccattgtgacatctgtgacaaccatgtctacacctacatcaacagcacca
gtatcaacaccaaacctgccaccacagccgacatacagtttccatgatgtcaatgcttca
tccttcacaggcttggctcagcacatcatcatcaatgatcagattgctctgttgcatcag
aatccccagctgaagcaatatgtgcgtccagccattgagaggtctgtacaggagttgcta
ccaccagtagtggagagatccatcaagatagcactaaccacatgtgaacagattgtcagg
aaggactttgccttggaccccgaggagatgcggatgaggtcggcggcacactacatggtt
cggaacatcactgccggtctggctctcatcacctgcagggagccactcttcatcagtatt
aacaacaacctcaagaatgccttcatggccacgctcaggggtgccacgcaagcacagaag
actctgatcgaagaggctgccacacttgtggctcaggacaacgcggaactggcctgtgct
ttcatacagaagacagcagttgaaagggctataccagagatggacaagaggcttgctact
gagtttgatttgaggaaacacgccagatcggagggaagaaggtactgtgatcctattgtt
ttgccctaccaagctgagaggatgccagatcagattcgactcaaggtgggaggtgtgacg
ccccagcagattgcagtctatgatgagtttgccaggaacatccctggcttccttcccctt
actgatgccacatttccacctggaatctcaaagcccacaccatcgtacgcacctgatgag
atcacaatgatctatgagaagattgcccgggacatagagcagcatctgcaacagatgatg
ggcatccctgctggcagccccatggggtcccagctccacagtctgctggaggctgttctc
ctggccaggaactccagagagattgttacagctatagctttactgcagaaggctgtggag
ggtttgctagaccagtactccatgaactccttgaccaacacagaccaggaaatgctgctc
cgattcagggagtgtcatctcgttgtactgaaagggctacaggatgcccgagcttatggg
ccacagtgggtcaacaaggaggtcacaaggtgtttgatccagtgtcgtgatgagttcaag
tacaacatagatgcagtggactgcctcatacgcagcggcctagtcaaccttcagcaatat
gatgtgtacctgtcccaattgatggagaacggcctcaaccatgttgctgtctctttctcc
atgcagctagtgcaacgattctgtattgatgacaagcacaacagttctgtcagtgaggct
gatttctacaatacgatagaagctcttggtgccattgcatctcgatcaagacagcaccca
gaagggctgtcaacactgattgagatcatccgtcagaacagtgatggaggactacttgat
cgaacgccaggtggcccaacatccatgatgcagtctggaatctcccaagcgcgagagttt
gacgacccccctggcctgaatgagaaaacagagtatttactgagggagtgggtcaacatg
taccactccccggcagctgggcgggacagcacaaaggccttttctgcttttgttcagcag
gtgatgcaccagcaaggtatcctcaagactgatgatttaatcacccgtttcttccgtctg
tgcaccgagatgtgtgtggatctgtgctaccgggcactcagtgagcagacgcacacaagc
ccaactctcatcagagccaagtgtttccatacactggatgcatttgtccgactcattgca
ttgctagtgaaacactcaggggatactacaaacactgtcaccaagatcaaccttctcaac
aaggtactgggaatagtagctggggtgctacttcaggaccatgaagtccgctacacagag
ttccagcagctgccttatcaccgtatctttatcatgctcttcatcgagttgaacgcacca
gaacccatactagagagcatcaactttcaagtgttagcagcattctgccatgtgttccac
atcttgcgacctgggaaagcccctggatttgcttatgcctggttagagctggtctctcac
cgtgtcttcatcggtcggcttcttgccctcacacctcaacagaggggctgggggatgtat
gctcaactgttgattgacctgttccgcttcctctcccctttcttgaggaatgctgaactg
accaaaccaacacagcttctctacaggggaacattacgagtcctgttggtcctgctccat
gatttcccagaattcctctgtgattatcactatgcattctgtgatgtcataccacccaac
tgcatccagatgcgcaacctcatcctcagtgctttccctcgcaacatgaggctgccagac
cctttcacccccaacctcaaggttgacactcttcctgacatcacacatccccctcgcatc
ctaaccaactttgtcaacatgattcagcctgcatctttcaaaaaggacttggactcatac
ttgaagacaaggactcccatttccttcttgtctgaacttaggagcagtttacagtcaaat
gagcctggctgtcactacaacatacccttgatcaatgcactggtcctgtacgtgggcaca
caggccatccagttcatacataccaagggccagacaccagctatcagcaccatagctcct
tcatcacatatggacatcttccagaatctcgctgtcaaccttgacacagaaggtcggtac
cttttcctgacagcgatagccaaccagctacgttaccccaacagtcatactcactacttc
agctgcacgctgctctacctctttgtgcaggctaacaatgagcagatccaggaacaaatc
accagagtgctacttgagcgactaatcgtcaaccggccccacccctggggtcttctcatc
acattcattgagctcatcaaaaactctacattcaagttttggagtcatgagtttgtccac
tgtgcaccagagattgacaagcttttcgaatctgttgctcggtcctgcatgcagccaaaa
cagagcagcaactcacgagaacctgagacggctgaagttcactag
DBGET
integrated database retrieval system
