Haliotis asinina (tropical abalone): 137273508
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Entry
137273508 CDS
T10448
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
hasi Haliotis asinina (tropical abalone)
Pathway
hasi03018
RNA degradation
hasi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hasi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137273508
09123 Folding, sorting and degradation
03018 RNA degradation
137273508
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hasi03019
]
137273508
03041 Spliceosome [BR:
hasi03041
]
137273508
Messenger RNA biogenesis [BR:
hasi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
137273508
mRNA degradation factors
5'-3' decay
Lsm complex
137273508
Spliceosome [BR:
hasi03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
137273508
Complex C
U2 snRNP components
137273508
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
LRR_9
Motif
Other DBs
NCBI-GeneID:
137273508
NCBI-ProteinID:
XP_067662327
LinkDB
All DBs
Position
2:27059931..27065204
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AA seq
96 aa
AA seq
DB search
MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQFLNIKLTDISITDPDKYPHMLSVKTC
FIRGSVVRYVQLPADECDTQLLQDAARKEAAQNKQR
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgctcttctattcctttttcaagtcccttgttgggaaagatgtggtggtagagctgaag
aatgatttgagtatttgtggcacgctacattctgtggaccagtttctcaacatcaagttg
acagatatcagcattacggaccctgataaataccctcacatgttgtctgtaaagacatgc
ttcattcgaggatctgttgtgcgatatgttcaactgcctgcggacgagtgtgacactcag
ctcctgcaggatgcagctcgcaaagaggcagctcagaacaaacagcgatga
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