Haliotis asinina (tropical abalone): 137278069
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Entry
137278069 CDS
T10448
Name
(RefSeq) superkiller complex protein 3-like
KO
K12600
superkiller protein 3
Organism
hasi Haliotis asinina (tropical abalone)
Pathway
hasi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hasi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
137278069
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hasi03019
]
137278069
Messenger RNA biogenesis [BR:
hasi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
137278069
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_16
TPR_19
TPR_14
TPR_2
TPR_17
TPR_CcmH_CycH
TPR_1
TPR_11
TPR_12
TPR_8
TPR_9
TPR_6
ANAPC3
ARM_TT21_5th
ARM_TT21_2nd
TPR_7
TPR_15
ARM_TT21_C
SNAP
TPR_20
Motif
Other DBs
NCBI-GeneID:
137278069
NCBI-ProteinID:
XP_067666254
LinkDB
All DBs
Position
3:complement(43688599..43716847)
Genome browser
AA seq
1542 aa
AA seq
DB search
MDSKEVKNALKNAREAIRNKEFKEALRHCKSVLASDKTNYNALVFVGVAAEGLEQADQAL
KAYKKAIDAAPEQILAWQGLCGLYEKNPSPDNDVDLASVYKKLMSLQESDKEKRLDIGRK
LAKLQGKLGNVDEAVSMYQRVLLEELGAQQRMNTLMSLFDILHSQQTLSAEYQKLLLTTC
KEAVSLEDLPAEGSERLIHQYLELLIKQGPRSSLWEECQSLHARFPANPYVLETWTVLLM
EDLLQGSDDTVSSTLKDVSQKLGALSANNVYVSLSQGVVYLAEKKLMEARDLLQQGMNSL
NRVVSGYVFLARCHQQLHANLPCVDVADRGLMALEKKNRLLTVPSKSITCELQLMKATCL
YRVGSPHCLAQAREILSQDVIESSESRTLLVYVCLKQGNVADAQNHLDSVPDSAGEREAV
RGRIMFHTGQYMEALSRFEKLTEEAPDVSGHHYMLGRVLWQLRDSGDLEGVQERCFKAFL
KAAKLDPYNSEIFLYLGHFYATVQKDDVKAKRCYQKAYDLDPGNEEAGAALCDILVAIGE
DEEAKGLLEAATSQASAGCGKWAWLRLGLYQVRHDDPTIAVASFQAALRADPRDKHVWEC
LAEAYLHRGSYTAALKTFTKAAELNPDSVYSLFQMASIKQTLGEYPEAVAEYKAILEKSH
NYVPALKGLGETLLLLARQHLTTCLDGLARDMCQEAMVYLTRAVSQRADLSCLWKLMGDA
CTVLQPLAPETFSLQLPAKLVQQSSQDVVTLGKMEVLQVGARCYGRALKSIPESASLWHD
LGVNYFHQSDLSTSASVELSQKAIQALKKAVSLDPNNFRHWNALGVVVCAKYCYKPELAQ
HCFIKSSTNVAAWTNLGTLYLMNDNVQLAHEAFKVAQSLDPTYVACWIGQALIAEIVGHD
DAMDLFRHTTELANHMEGAVGYASWVCQILQDHSKRNTDLYLYSIKQMAAIPAAADALAR
YTGRVKTDVTAYNMYGLLLEHQKLYSAAAKAFRSAVEILEKDSSQIEQLGKVRINYGRVL
CKGGNYQESVEQFEKAGGLEKCEDLCFLGLAHYKLGRCQDSYQAYNTALGVAELDEDKSH
IYSALGMVAYKFGDIEGAKTALFNGSQQAPPSAPGLQALCSLGLLQSDATLATAAIQELF
KLGDNDPSLPDVTWLSASLCILQGNLQEAKRSVQRIIQKNPARPQLWRVLCSILTSFFPD
LGDAASQCAQASQDLAQAQDKSVPTLVTCGQLQGGLHSRRDTQNNALSSAQKALHLYPDK
VSSQCSLIAAVHAEAVLSGAERRCHLLNIEQQRIQEVLEHSPQPEVALWCWRQRVLSLIL
CNKGSEAKEALQQLSSLPSAPDTCKLFAEVLQGALTDDIQSVQGKVCVEGRQLHLWQILT
EMYLQKGMMAEADTTIRHTLQLAEAESQRQVKLESLLKLASLSYQQIMSGSGDKQQLRGV
FDEAAAEVLKIHPGCSAVLLMMGALSMKSNKVSRRHYQQALIAGSARASRGHDVSLARQA
VIRNVIYSQKDLPLAKKIADEAVTDGDEATVKLYSDLMGDED
NT seq
4629 nt
NT seq
+upstream
nt +downstream
nt
atggattccaaggaagtaaagaatgctctgaagaatgcaagggaagcaattcggaacaaa
gaatttaaggaagctctccgacattgtaagtctgtgctggctagtgacaagaccaactac
aatgccctggtgtttgtgggagtggctgctgaagggctagaacaggctgatcaggcactt
aaggcttacaaaaaagccatagatgcagcacctgagcagattctagcatggcagggcctg
tgtgggttatatgagaagaacccatctcctgacaatgatgtggacttggctagtgtgtac
aagaagctgatgtctctgcaagaaagtgacaaggaaaagaggctggacattgggaggaaa
ctagccaagcttcaggggaaactgggaaatgtggatgaggctgtgagtatgtaccagcgt
gtgctgttggaggaattgggagcacaacagcggatgaacacactcatgtctctgtttgat
atcctccacagtcagcagactctctcagctgaatatcagaaactgttgttgacgacatgt
aaagaggcggtgtcattggaagacctgccagcagagggcagtgagaggctgatacaccag
tacctggagctgctcatcaagcaaggtccccggtcaagcctttgggaagaatgtcaaagc
ctccatgcccggttccctgccaacccctatgtcctggagacctggactgtgttgcttatg
gaggacctcctccagggttctgatgatactgtcagctcaactctgaaagatgtgtctcag
aagcttggggccctgtcagccaacaacgtatatgtgagtctgtctcagggagtggtctac
ttggcagaaaagaagctgatggaagccagggacctgcttcaacaaggaatgaacagtctt
aacagagttgtgagtggttatgtgttcttagcaagatgccaccagcaactacatgcaaac
ttgccatgtgtcgacgtcgctgatagaggactgatggcactcgagaagaaaaatcgcctg
ttgacagtacctagcaaatccatcacctgtgagctccagctcatgaaagcaacctgtttg
tatagggttgggtcaccccactgtctggctcaggccagggagatactgtcacaggatgtg
atcgaaagttctgagtcgagaactctcctggtgtatgtttgcctgaagcaaggaaatgtt
gcagatgcacagaaccacctggatagtgtgccagacagtgctggggagagagaggcagtc
agaggccgcatcatgttccatacaggacagtacatggaggctctctcacggtttgagaag
ctgactgaggaagctcctgatgtgagtggacatcactacatgctggggcgggtcctgtgg
cagctgcgagactctggggacctggagggggtgcaggagagatgcttcaaggccttcctt
aaggcagccaaactggacccctacaacagtgagatattcctttacctgggacacttctat
gcaactgtgcagaaggatgatgtgaaagccaagcgttgctatcagaaggcatatgacctt
gaccctggcaatgaagaggcaggagctgccctttgtgacatcttggttgccattggtgaa
gatgaagaagccaaaggccttctggaggctgccacaagtcaagccagtgcaggctgtggc
aagtgggcctggctgcgactaggtctgtatcaggtgcgacatgatgacccaaccattgct
gtggcatcattccaagcagctctgagggcagacccccgagacaagcatgtgtgggagtgt
ttggctgaggcatacttacatcgtgggagctacacggcagctctaaagacattcacaaag
gcagctgagttgaacccagactcggtgtacagtctgtttcaaatggccagcattaaacag
accctaggagagtatccagaggctgtggcagagtacaaggccatcctggagaagtctcac
aactacgtgccagcactcaaaggtcttggtgaaaccctcctgctgttggcacggcaacat
ctgaccacctgtcttgatggactggctcgggacatgtgtcaagaggccatggtgtatctg
accagagctgtgtcccaacgtgcagacctgtcgtgcctgtggaagctgatgggggatgcc
tgtactgtgctacagcctctggctccggaaacattcagtctgcagcttcctgccaagtta
gtccagcagtcgtcccaggatgtggtgaccctggggaagatggaagtcctgcaggttgga
gccaggtgctatggtagagccttgaagagtattccagaaagtgcctctctctggcacgac
ttaggagtcaactatttccaccaatcagacctgtccacatcagcatcagtggagctatcc
cagaaggccatacaggcactgaagaaggctgtcagtctggaccctaacaacttccgccat
tggaatgccctgggcgtagtggtgtgcgccaaatattgctacaaacctgagctggcccaa
cactgcttcatcaagtccagtactaatgttgctgcctggaccaacctggggacattgtac
ctgatgaatgataacgtccagcttgcccatgaagctttcaaagtagcccagagtcttgat
ccgacttatgttgcctgctggattggacaggctctgatagcagagatagttggacatgat
gacgccatggacctgttccgtcacacaacagaactggccaatcatatggagggtgctgtg
gggtatgccagctgggtctgtcagatactacaggaccacagcaagaggaacacagatctg
tacctgtacagcatcaagcagatggccgccatccctgctgcagcagatgctcttgccaga
tatacaggtcgtgtaaagaccgacgtgacagcatataacatgtacggtctactactggag
catcaaaagctgtacagtgccgcagccaaggctttcaggagtgctgtggagatcctggag
aaggactccagccaaattgagcagctgggaaaagtgaggatcaactatggaagagtccta
tgcaagggaggtaactaccaggaatcagtggagcagtttgaaaaggctggaggtctggag
aagtgtgaggatctctgtttccttggcctggctcactacaagctgggcagatgtcaggac
agctatcaggcctacaacacagcccttggtgttgctgagcttgatgaagacaagtcccac
atctactccgcccttggcatggtggcctacaagtttggagatattgagggtgccaaaaca
gcgctgtttaatggatcccagcaggctccaccttccgctccaggactccaggctctgtgc
tcactaggactcctgcagtctgacgccaccctggccactgcagccatacaggaactattc
aagctgggagataatgacccttcactaccagatgtcacctggctgtctgcttctctgtgt
atactacagggtaatcttcaagaggccaagcgttctgttcagagaattattcagaagaac
ccagcacgtccacagttgtggcgagtattgtgttccattctgaccagcttcttcccagac
ctgggagatgcagcttcccaatgtgctcaggcatcacaggatctcgctcaagcacaagac
aagtctgtacccactcttgtgacctgtggccaactccaaggtggactccacagcagacga
gacacacagaacaatgctctgtcgtctgcacagaaggctttgcacctctatccagacaag
gtgtccagtcagtgcagcttgatagcagctgtccatgctgaagctgtcctgagtggtgct
gagaggcgatgtcacctgctgaacattgaacagcagcgcatacaagaagtgctggaacac
tccccgcagccagaagtggcactctggtgctggagacagagagtcctcagtctgatactc
tgtaacaaagggagtgaggccaaggaggctctccagcagttatcctctctgccatctgca
ccagacacctgtaaactgttcgcggaggtccttcaaggagccttgactgatgacatccag
tctgttcaagggaaggtctgcgtggaggggagacaactccatctgtggcagatactgaca
gagatgtacctgcagaaggggatgatggcagaggcagacacaaccatcagacacacactg
cagctggccgaggctgagagtcaacgacaggtgaagctagagtcactcctcaagttggcc
tctctctcataccaacagattatgtcagggagcggggacaagcagcagctgcggggtgtg
tttgacgaggcggctgctgaagtcctcaagattcaccctggctgctcagctgtgctgttg
atgatgggggccctgtccatgaagagtaacaaagtttctcgtcgacactaccaacaggct
ctgattgctgggtcagctagagcaagtagaggtcatgatgtttcacttgctcgtcaggct
gtcatcaggaatgtcatctactcccagaaggatcttcctttagctaagaaaattgccgat
gaagcagtaactgacggtgatgaggcaacagtgaagctctactctgaccttatgggagac
gaggactga
DBGET
integrated database retrieval system
