Hafnia alvei: AT03_03190
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Entry
AT03_03190 CDS
T03425
Symbol
hfq
Name
(GenBank) RNA-binding protein Hfq
KO
K03666
host factor-I protein
Organism
hav
Hafnia alvei
Pathway
hav02024
Quorum sensing
hav03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AT03_03190 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AT03_03190 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hav03019
]
AT03_03190 (hfq)
03036 Chromosome and associated proteins [BR:
hav03036
]
AT03_03190 (hfq)
Messenger RNA biogenesis [BR:
hav03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
AT03_03190 (hfq)
Chromosome and associated proteins [BR:
hav03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
AT03_03190 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Herpes_capsid
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
AIU71490
UniProt:
A0A097QYD8
LinkDB
All DBs
Position
684338..684643
Genome browser
AA seq
101 aa
AA seq
DB search
MAKGQSLQDPFLNALRRERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAIS
TVVPSRPVSHHSNNPGTGGSSNYHGSNQASSPSSQDSDDAE
NT seq
306 nt
NT seq
+upstream
nt +downstream
nt
atggctaaggggcaatctttacaagacccgttcctgaacgcactgcgtcgcgaacgagtc
ccagtttcgatctatttggtgaatggtattaagctgcaaggccagattgagtctttcgat
cagtttgtcattctgttgaaaaacacagttagccagatggtttataagcacgcaatttct
accgttgttccgtctcgtccggtttctcatcatagcaataatccgggaactggcggcagc
agcaactaccacggtagcaatcaggcgtcttcaccgtcgtctcaggacagcgatgacgct
gaataa
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