Hafnia alvei: AT03_10130
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Entry
AT03_10130 CDS
T03425
Name
(GenBank) transcriptional regulator
KO
K03746
DNA-binding protein H-NS
Organism
hav
Hafnia alvei
Brite
KEGG Orthology (KO) [BR:
hav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hav03036
]
AT03_10130
03400 DNA repair and recombination proteins [BR:
hav03400
]
AT03_10130
Chromosome and associated proteins [BR:
hav03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
AT03_10130
DNA repair and recombination proteins [BR:
hav03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AT03_10130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_HNS_N
Histone_HNS
DUF3037
PaaX_C
DUF6626
MscS_porin
TetR_C_24
DUF6280
BST2
SpoIIIAH
Motif
Other DBs
NCBI-ProteinID:
AIU72705
UniProt:
A0A097R1V2
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All DBs
Position
complement(2203689..2204096)
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AA seq
135 aa
AA seq
DB search
MSEALKILNNIRTLRAQARECTLETLEEMLEKLEVVVNERREEDSQAQAEIEERTRKLQQ
YREMLIADGIDPNELLQTMAAGKVAGKAKRAARPAKYQYVDENGETKTWTGQGRTPAVIK
QAIEEQGKSLDDFLL
NT seq
408 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagcattaaaaattctgaacaacatccgtactcttcgtgctcaggctagagaa
tgcactttagaaactctggaagaaatgctggagaaattggaagttgttgtaaacgaacgt
cgtgaagaagatagtcaggcacaagctgagatcgaagaacgtactcgtaaattacagcaa
taccgcgaaatgctgattgctgacggtatcgatcctaatgaactgctgcagaccatggct
gctggtaaagtagcaggtaaagcaaaacgcgctgcgcgtcctgctaaataccagtatgtt
gacgaaaatggcgaaactaaaacctggactggccaaggccgtactccagctgtgattaag
caagctatcgaagaacaaggtaagtctctggacgatttcctgctgtaa
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