KEGG   Helicoverpa armigera (cotton bollworm): 110376620
Entry
110376620         CDS       T05609                                 
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X7
  KO
K12604  CCR4-NOT transcription complex subunit 1
Organism
haw  Helicoverpa armigera (cotton bollworm)
Pathway
haw03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:haw00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    110376620
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:haw03019]
    110376620
Messenger RNA biogenesis [BR:haw03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     110376620
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     110376620
SSDB
Motif
Pfam: Not1 NOT1_connector CNOT1_CAF1_bind ARM_Cnot1 CNOT1_TTP_bind DUF3819 CNOT1_HEAT CNOT1_1st
Other DBs
NCBI-GeneID: 110376620
NCBI-ProteinID: XP_021190847
LinkDB
Position
1:complement(join(12296379..12296457,12299795..12300058,12300200..12300384,12300584..12301012,12302545..12302679,12302767..12302913,12303005..12303382,12303465..12303770,12303964..12304212,12304593..12305156,12305968..12307372,12307494..12310005,12310477..12310660,12311261..12311482,12319376..12319477))
AA seq 2386 aa
MNLDPLTFSLSQINYLVINLSKKNFKQTNQELSQLVSLYGLEAENQLLRCLLTEAAKNCW
DTDRPGNSSNNSIHASLLAQHLASLLNHPAKSTVICRAVDQPTRTLQKILKPSNTLLNRL
SRLLKLTTAEDVALSLVLRRNSSKTEIVNLSKQHLKKRFLDLVQCYLDAERGHQVERAGL
QECSPEVLQTLLTNLAHENFRLAAVTKDLFLKKLRIDFPREVVPIVLAPLLYPDDTKTPL
EEMTTADDMAAAMMDNSLAEIIRDIGYSFTSSVEECKNNMLNFGAREPTATDVAKIISTM
VRYHTTVQDGPPIQTPGNFWVGHDVKKEPLSQGHGDSWNAEVLVQTLKDLASNLNWKEVI
LQLDHPEFFVADRQGLSLLFTILRLGLQSAGYPSNIFPVEYLCRRWTNLEGQMSLITNIL
KHPDIFSFADHPFHPVSIDLLKSPPEADNKDVATWRCLYLVELLLYASERGYYMQVQELF
KIPLQYCPDVLMLALLQISPPVNVVRQELFSTLIPIFLGNHPNSGIILHHAWHNQNPNIK
AVIMHSMAEWYIRGDCDQSKLSRILDVAQDLKALSLLLNVQSFPFVIDLACLASRREYLK
LDKWLTDKIRDHGEAFVSSMVKFLQRRCPLVLGKGPEEQLPKAAQLPHETIATMLACLQL
CIPNVQQELQEAICNVIANCQTLILSKTRQSIAGIARPHTRVLETPFNPAGLGGQLFPPH
VDSITNLTPNVANMSLGAPANTAFAMPGTLGPLVTTPGSPSRLMGAGPNSPFAMMPLQHN
ANVANMGLARMVPAPAMDKPRIPDPIHFPEMMHNVAKEIEDEANGYFQRIYNHPPHPTLS
IDEVLDMLKKFQDSPNKREREVFSCMLRNLFEEYKFFPQYPDKELHITAQLFGGIIEKGL
VPSYVSLGLALRFVLDALRKPEGSKMYYFGIAALDRFKSRLKDYHKYCEHVRAIPHFSEF
PPHLIEYVEYGLQSQEPPSKPQGAVLPTSLAAMLNQTAVVTVSAPYRAVAPPISVISKVA
NCTSGGMGSRPSIANATNIDTLLTATDREEKINAPPEPIQDKTAFIFNNLSQLNLQPKCE
ELKEILTDEYYPWLSQYLVMKRASIELNFHALYSNFLDVLKIREVNKMVTKETYRNIKVL
LRSDKGIANFSDRSLLKNLGHWLGMLTLARNKPILHVDIDLKALVLEAYHKGQQELLYVV
PFVAKVLESCAKSVVFKPPNPWTMALMNVLAELHQEPDLKLNLKFEIEVLCKNLGLDIAN
LKPAIYLKDPEKVRQIEFQLSQPKPNKEAAAVVPVNPAIIQVPQMQMMPPPPPMIPTEDM
TVTAPTPTSGLMGDPNLMGVIGLPEPRFNYVDVNVSSTSAFGQKICFNPQILLFQNYPNL
KQFVKPAIERSIQEWIHPVVDRSIKYALTTCEQIIRKDFALDPDEVRMRTCAHHMMRNLT
AGMAMITCREQIISTISTNLKGAFATALMPSTPQQKEIIESAAAVLATENMELACAFIQK
TAVEKALPELDKRLLNDYEMRKLARQEGRRYYDPMVLSYQNDRLPERVRLRVGGPTEVQI
TVYEEFACNIPGFTPIRDVGMFLLKPAQDQMSQLTFSQVINPSQVYGTDEMSALISAAEM
FLANCIAVATLAVQGANMHSLLECLFLARRNRDFVSGCALLQKAVEGLLDGHIVQPGMSS
EHVEMMARYRDIHLRVLKLLEDQRVYGHVWTSKQITCCITECREELRYNIEAVDCLIRNH
LVNLPQYDLAIAHLMDSGNNYMAVAFAMQLVQLYLVDDRNNIYVSEGDLFHTAETLVRIL
SHSRQPPPEGLGSLIEMLRVNQDPSAYLGERSPLGPTAHIHSGILQVRAQNYDDPPGLQE
KTENLLREWRNVLLSPMTEIELAQNFNLYVHRMNMNGILKSDDMITRFFRIATQMCVENV
YQQLSEDRMNTPPIPPKRDKYYTMCDSFIKLVSLLIKNTPDGGNPTPKLNLLNKILGIIA
GCLLQDHEEHGTNFQQLPYHRLLLILFLDMNMAEPVLESMNYQVLTAFCHTLRIIRPNIA
PGFAYAWLEVVAHRAFINRVLAVTPQQKGWGMYSTLLIDLFKFLDPFLRNTELATPVMML
YKGTLKVLLVLLHDFPEFLCDYHYGFCDEIPPNCIQMRNLILSAFPRNMRLPDPFTPNLK
VDLLAEITLPPRAVINYNTIIPASQFKKDLDAYLKARAPVTFLSELRSNMQVLNEPGRRY
NCQLMNAVVLYVGTQAIAHIRSKGQTPNMSTIAHSAHMDIFQNFTVDFDFEGRYLFLNAI
ANQLRYPNSHTHYFSCCLLYLFAEANSEAVQEQITRMLLERLIVNRPHPWGLLITFIELI
KNPIYKFWSHEFVHCAPEIEKLFASVARSCIVDKTGAGGGEREIAE
NT seq 7161 nt   +upstreamnt  +downstreamnt
atgaacctggaccctttaacgtttagcttatcgcaaatcaattatcttgttataaattta
agtaagaagaacttcaagcagacgaatcaagagttgtctcagctggttagtctatatggg
ctagaagcggaaaatcaactcttgaggtgtctgctcactgaggcagcgaagaactgttgg
gatactgatcgtccaggaaattcgtctaacaatagcatccacgcgtctttgctcgcgcag
cacctagcatccttgctcaaccatccagcgaagtcgactgttatctgtcgcgctgtagac
caaccgaccagaacactacagaagatattaaaaccttcaaatactttactcaatcgactg
tcaagattgttaaagttaaccactgcagaggatgttgccctttcgctggttctaaggagg
aactcgtcgaaaactgaaatcgtaaatttatccaaacaacatctcaaaaagagattttta
gatctcgtacagtgctacctcgacgcagaacgcggacatcaagtggagcgtgccggactt
caggaatgcagccctgaagtgttgcaaactcttcttactaatctcgcgcacgaaaatttt
cgtttagccgcagtgacaaaggacttatttttgaagaagttacgaatcgatttccctcgg
gaagtagtgccaatagtgctcgcgcccctgctgtatcccgacgatacaaagacgcctctt
gaggaaatgactacagcagacgacatggccgcagccatgatggacaactctctcgcagag
atcatccgagatatcggctattctttcacctcatccgttgaggaatgcaagaacaatatg
ttgaacttcggcgcccgagagcctacggctacggatgttgccaaaattatatcgactatg
gtgagataccacacgacagttcaagacggaccaccgatacagacacccggcaacttctgg
gtcggccacgatgtcaaaaaagaacctttgtcccaagggcatggcgactcgtggaacgca
gaagtattagttcaaacactaaaggatctagcctctaaccttaactggaaagaggtcatt
ctacaactggatcaccctgaatttttcgtcgctgacagacaaggcttgagcttgctgttc
acaatattgcgactcggccttcaaagtgcgggctacccgtcaaatatattcccggttgaa
tatttgtgccgtcgatggactaatctagaaggtcagatgagcctcataactaacatactg
aagcacccagacatatttagttttgctgatcacccgtttcatccagtttctatcgattta
ctgaaatcacctcctgaagcggacaacaaagacgtcgcgacctggcgttgcctttacctg
gttgaactactgctgtatgcttcagagcgtggctattacatgcaagtacaagaactattc
aagataccactacagtattgcccggatgtattgatgctggctttacttcaaattagtcca
cctgtcaatgttgttagacaagagttgttttcaaccctaataccaatatttttgggcaac
catcccaattcaggaatcattttacaccatgcttggcataatcaaaaccctaatataaaa
gctgtaattatgcattcaatggcagaatggtacattcgtggagattgtgatcagtcaaaa
ctttcaaggatcttagacgtcgcacaggatttaaaggcgttgtccttattattgaatgtt
caatcgtttccttttgtgatcgaccttgcttgtctagcgtcccggagggaatacctaaag
cttgataagtggttaaccgacaaaattagggatcatggcgaagcctttgtctcctcgatg
gttaaattcttgcaaagaagatgcccattagtccttggtaaaggaccagaagagcagtta
ccaaaagcagctcagttaccgcacgaaacgattgctacgatgctggcatgcttacaatta
tgcattccgaatgttcaacaagagctacaggaggcgatctgcaatgtaattgctaactgc
cagactctcatactaagtaaaacacggcagagcattgcgggaatcgcacgacctcacacc
agagtcttggaaacaccgttcaaccctgctggattaggtggtcaattattcccaccacat
gtggattccatcactaatttgactcccaatgtagcaaacatgagcttgggtgcaccagct
aacacagcgtttgcaatgcctggtaccttaggaccccttgtgactacgccaggctcgcct
tcgcgtcttatgggtgctgggcctaatagcccgtttgcaatgatgcccttgcaacataac
gcaaatgtggctaatatgggattggccagaatggtccctgctccagcaatggataagcca
cgtattccagatccaattcacttccctgagatgatgcataatgttgccaaggaaattgag
gatgaagctaacggctattttcaaagaatctataaccatccgcctcatcccacgctgtcg
atagacgaagtgcttgatatgctgaaaaagtttcaagattcgccaaacaaacgagagcgt
gaggtattctcgtgtatgctgcgaaacctctttgaagaatacaaattctttcctcagtat
ccggacaaagaacttcacataactgctcaactcttcggcggaatcatagagaagggccta
gtacccagttacgtctcgcttggcctggctttaaggtttgttctggacgcgttgcggaaa
ccggagggctctaaaatgtattactttggtatagcggctttggacagattcaagtcgcgc
ctcaaggattatcacaaatactgcgagcatgttagagctatacctcattttagtgaattc
cctccgcatctcatcgagtatgtagagtacggactccagagtcaagagccgccgtcgaaa
cctcaaggggctgtgttgccgactagcctggctgctatgttaaaccaaaccgcagttgta
actgtatcagctccgtatagagctgtcgccccacctatttcggtgatatcaaaagtggca
aattgcacgtcaggtggtatgggaagccgaccatccattgcgaacgccacgaacattgac
acgctgctgacagctacggacagggaagagaaaatcaacgcgccgcctgaacccattcaa
gacaaaacggcttttattttcaacaacttaagccagctaaacttacaacctaaatgcgaa
gagctcaaggaaatactcactgacgaatattatccctggctgtctcaatatctagtcatg
aagagagcttctatcgagctcaacttccatgcattatattccaatttccttgatgttctt
aaaattcgcgaggtcaacaagatggttacaaaggaaacttatcgtaacatcaaagtatta
ttgcgctcagataaaggcatagcaaacttttctgatcgttcattactgaagaatctcggt
cactggcttggcatgcttacgttagcacgtaacaaacctattctgcatgtcgatattgat
ctaaaagcattagtactcgaagcttatcataaaggccaacaggaactgctgtatgtagta
ccttttgtggccaaagttttagaatcatgcgctaaaagcgttgttttcaagcctcccaat
ccttggacgatggcattgatgaatgtactagccgagttacaccaggagccagatttaaaa
ctgaatttgaagttcgaaatagaagtactgtgcaagaatctaggcctagatatagctaat
ctgaaacctgccatttatttgaaagatcctgaaaaagtaaggcagatagaatttcaactg
tcgcagccgaaaccgaataaagaggcagcggcagtggtaccggtcaacccagcaatcatc
caggttccgcaaatgcaaatgatgccacctccacctcccatgataccgacggaggacatg
acagtcaccgcgcccacgcccaccagcggcctcatgggcgaccccaatctaatgggagtc
atcggcctgcctgagcctagattcaattatgtggacgttaatgtttcgtccacatctgca
ttcggccaaaagatatgcttcaatcctcagattctcttattccaaaactatccgaacttg
aaacagtttgtcaagcccgcgatcgagaggtcgatccaggaatggatccaccctgttgtg
gaccgatcaattaagtatgctttaactacgtgtgagcaaataataaggaaagacttcgcg
ttggatcctgatgaagtgagaatgcgaacctgcgcgcatcacatgatgcgtaacctgacc
gctggcatggcgatgatcacgtgtcgcgagcagatcattagcactatcagcaccaacctg
aagggtgctttcgcaaccgccctgatgccctccacaccccaacagaaggagattatagaa
agcgcagctgctgttctagctaccgaaaatatggagttggcgtgcgcgttcatccagaag
actgcggtggagaaggcgctgcccgagctggacaagcgcctgcttaacgactacgagatg
cgcaagctcgcgcgccaggagggccgtcgctactacgaccctatggtgctatcctaccag
aacgaccgtctgcccgaacgcgtccgtctccgcgtcggcggccccacagaagtccaaatc
accgtctacgaagaatttgcatgcaacatccccggcttcacgcccattcgcgacgtcgga
atgttcttgctcaaaccggctcaggatcaaatgtctcaactcacgttcagccaggtcatc
aatccgagtcaggtgtacggcacggacgagatgagcgcgctgatctccgccgccgagatg
ttcctcgccaactgcatcgccgtcgccacgctcgccgtgcagggcgctaacatgcactct
ctcctcgagtgcctcttcctcgcaagaagaaaccgcgactttgtgtccggatgcgctttg
cttcagaaggcggtggaggggttgttggacgggcacatcgtgcagccgggcatgagcagc
gagcacgtcgagatgatggctcgctaccgcgacatccacctgcgcgtgctcaagctgctg
gaagaccagcgcgtgtacggacacgtgtggacctccaagcagatcacctgctgcatcacc
gagtgccgcgaggagctgcgctacaacatcgaggccgtcgactgcctcatcaggaaccat
ctggtcaacttgccacagtacgaccttgccatcgctcacttgatggacagcggcaacaac
tacatggctgttgcgttcgcgatgcaactggtgcaactgtaccttgtagacgacaggaac
aacatctacgtcagcgaaggcgacttgttccacactgctgagacgctggtcagaatcttg
tcccactcccgccagcctccgcccgagggccttggatccctcatcgaaatgctccgagta
aaccaagatcctagcgcctatttaggggaaaggtccccgttaggaccaaccgcacacatc
cactctggaatcctgcaagttagagcccagaattacgacgacccgcccggcttacaagag
aagacggagaatcttctccgtgaatggagaaacgtgcttctcagcccaatgaccgaaata
gaactcgctcagaatttcaacttgtatgtccatcgcatgaacatgaacggaatccttaaa
tctgatgacatgatcacgagattttttagaattgctacgcagatgtgcgttgagaacgtt
tatcaacagttgagtgaggataggatgaacactcctcccataccaccgaagagagacaaa
tactacacaatgtgcgactcattcataaaactggtttcgctccttatcaagaacacacct
gatggcggcaatccgacgcccaagttgaacctcctaaacaagattttaggcatcattgct
ggctgcttgctgcaagatcatgaagagcacggtacgaacttccagcagctaccgtatcat
cgtctactactcatcctattccttgatatgaatatggctgaacccgttttagaatcgatg
aactatcaggttctaactgcattctgccatacccttcgtatcattcggcctaacatcgcg
cctggcttcgcgtacgcctggctcgaggtcgtagcgcatcgtgctttcattaaccgcgtt
ctagcggtaacaccacagcagaagggctgggggatgtactccacacttctgatcgacttg
ttcaagttcctagatcctttccttcgcaacacagagctcgcgacgcccgtcatgatgtta
tacaagggcacgttgaaggtgcttctcgtgcttttgcatgacttccctgagttcctgtgt
gattatcactatggtttctgcgacgagatcccgccaaactgcatccagatgaggaacctc
atcctgtctgcgttcccccgcaacatgcggctcccggatcccttcactcctaacctgaag
gtggatctacttgcggagatcacgctgccaccccgcgcagtgatcaactacaacactatc
atccctgcgtcacagttcaagaaggatttggatgcttacctgaaggctcgcgcgcctgtc
acgttcttgtcagaactgaggagcaacatgcaggtgttgaacgagcccggtcgtcggtac
aactgtcagcttatgaatgccgtggtgttatacgtcggaacgcaggctatcgcgcacatt
cgctccaagggacaaacgcccaacatgtccaccatagcacattccgcgcacatggatatc
ttccagaatttcactgtagacttcgacttcgaaggacgatacctattcctgaacgcgatc
gcgaaccagctgcggtaccctaacagccacacgcactacttctcgtgctgcctcctatac
ctgttcgccgaggccaattctgaggccgtacaggaacaaatcacgaggatgctgctcgaa
cgactcatcgtcaaccgcccccacccctggggcctactcatcaccttcatcgaactcatc
aagaacccaatctacaaattctggtcgcacgagtttgttcattgcgcacctgagatcgag
aagttattcgcatcagtggcacgatcctgcattgtagacaagacgggtgcgggagggggg
gaaagagagatagccgagtag

DBGET integrated database retrieval system