Harmonia axyridis (harlequin ladybird): 123672009
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Entry
123672009 CDS
T10650
Name
(RefSeq) exosome complex component RRP42
KO
K12589
exosome complex component RRP42
Organism
haxr Harmonia axyridis (harlequin ladybird)
Pathway
haxr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
haxr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123672009
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
haxr03019
]
123672009
Messenger RNA biogenesis [BR:
haxr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
123672009
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
123672009
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
123672009
NCBI-ProteinID:
XP_045461907
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Position
2:complement(13189366..13190937)
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AA seq
283 aa
AA seq
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MNLSEGEKTFILHGVEMNFRVDGREREDYRPMELELDVVSHAFGSARLRLANTDVLVAVK
IEVDTPFPERPLEGKIEFFVDCSANATPNFEGRGGEELAIELSNCLSSAYSSNEVLDLTK
LCILKGRKCWKLYVDILLLDVGGNLYDAVSIAVKSALWSTQVPKIKALNVDGSNVDIQVL
DDIYSCTKLEASGAPLMVTICKIGERCVIDPDAAEEQCSSGAVVVAVSRGHISTVLQTGT
GSFHPDTLKDSLNLGVNIAQKVEKVLLKTLEEIQPNQDIGFLK
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgagcgaaggcgaaaaaacattcatactccacggggttgagatgaattttcga
gtagatggtagagaaagagaggattatagacctatggagttggaattagatgttgtgtcg
catgcatttggttctgctagattacgtttagctaacacagatgtgttggtagctgttaaa
atagaggttgatactccttttccagaaaggccattagagggtaaaatagaattttttgta
gattgttctgccaatgctactccaaactttgaaggtagaggaggtgaagaattagccata
gaattatcaaattgcctctcttcagcttacagctcaaatgaagttcttgatttaactaaa
ctctgtattctgaaagggaggaaatgttggaagctatatgttgatattctgttattagat
gttggaggtaatttatatgatgctgtatctatagctgttaaatcagctttgtggagtacc
caggtgccaaaaataaaagcattgaatgtggatggttctaatgtggatattcaagttctt
gatgatatttacagttgcacaaaacttgaagcatcaggggctccccttatggtaactatt
tgtaaaataggtgaaagatgtgtaatagacccagatgcagccgaagaacaatgttcttca
ggtgcagtagttgttgctgttagtagaggtcacataagcaccgttttgcaaacaggaaca
ggatcatttcatccagatacattgaaagatagcttgaatcttggagttaatattgcacaa
aaagttgaaaaggtcttgctgaaaacccttgaagaaatccagccaaatcaggatatagga
ttcctgaagtga
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