Harmonia axyridis (harlequin ladybird): 123672067
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Entry
123672067 CDS
T10650
Name
(RefSeq) CCR4-NOT transcription complex subunit 1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
haxr Harmonia axyridis (harlequin ladybird)
Pathway
haxr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
haxr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123672067
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
haxr03019
]
123672067
Messenger RNA biogenesis [BR:
haxr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
123672067
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
123672067
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
CNOT1_TTP_bind
ARM_Cnot1
DUF3819
CNOT1_HEAT
CNOT1_1st
Creb_binding
Motif
Other DBs
NCBI-GeneID:
123672067
NCBI-ProteinID:
XP_045461997
LinkDB
All DBs
Position
2:21996755..22020445
Genome browser
AA seq
2356 aa
AA seq
DB search
MNLDSLSFTLSQISYLVASLNKKNQKKVVTELTKLISSFGLEADRQLLQCLFSSVEFSES
ANKVAALSTQNQVLLEQCTRLLDKPSLITSVCYTVNNQISNTKNLKFGQQFFQQLGKCLR
LTAVQEVVFALALRHSPNSEVASLAQTHLKASVPNLVQTYIDTQGSSRQHEGGLHETSPE
VLNLILTAILKSPKEVGLSNDIHQTFLNTLQRDFPIDLVPVVLAPLVYPEQCELAPDMSS
DGPGLSGGLLDTSLADVITEMGYSFTSSIEECRSSLVKLGGRDITPSVIARVLSIMCRTH
SGLDDIQQNSSFNINEVRTSWNIDLFVQAVKETVPNFQWKNVFSDLDHPDFMIKDRQGLI
LLISALRQGLQSHGFHLESSFPIDQFYRRWNNVDGQFSLIQAILKNSDVFCFADYPCISV
AVDILKTPPEQDNKDLANWKSLNLVELLLNLSECNLFSQVFELFKYPLHNCADVLVLALL
QISGPVTVLRQELLTSLIPIFLVNHPNSAIILHHAWHCSNINIRPVIMHAMAEWYGRGEC
DQTRLSRILDVAQDLKALSLLLNAQNAQSYPFIIDLACLASRREYLKLEKWLADKIREHG
DPFVMACVKFLHRRFPQMTGKIEEPLTKAAPLPTETISTMLLCLQNTLTSVGPDCHEAIM
SIGNQFSLVLKNRTQPTILRPSGTFSTTALAGQLYNHTSVESISGLSTNLANMTLGGPPS
TAFNLQSGLGPLVPSPGSPSRILNAGTSNSPFSMIQMQHQGPVGTSSSLVLGVNQLNNIG
RMGPAPTLDKARLQDYNLFPEISPNVSKDIEDEANSYFQRIYNHPPHPTLTIDEVLDMLK
RFQESNNKREREVFNCMLRNLFEEYKFFPQYPDKELHITAQLFGGIIERGIVTSYVALGL
ALRFVLDALKKPEGSKMYYFGIAALDRFKSRLKEYHKYCEHVRAITHFVDFPPHLQEYVE
YGLQSLEPPSKPQGSTLPASLTTMLAPNSMQVTQSYKNTPAVSSNAPSKSSTTTTSTLGS
RPSIANATNIDTLLVATEKEDKIIAPPDPVQDKTAFIFNNLSQLNLKTKCEELREILLEE
YRPWLSQYLVMKRASIELNFHGLYSNFLDTLGVAEVVKLVTEETHRNIRVLLRSDKVIAN
FSDRSLLKNLGHWLGIMTLGRNKPILQNDLDLKSLLVEAYNKGSQELLYVVPFVAKVLEA
CSKSKVFKPPNPWTMAIMNVLAELHQEQDLKLNLKFEIEVLCKNLEIEVNQLKPSVYLKD
PERIKKIEYQLSQQAKKDTSISQVHTQAPNLSESELSNIGPGQPTNTTPTSATPAPPEPK
YSYSDIQLAGMAAINTLTVINQNILLFQTTPQLKSVVKPAIERAVQEWIGPVVDRSIKIA
LQTCENIIRKDFALDPDENRMRLAAHYMVRNLTAGMAMITCRDQLLSAINTNCKQALLNT
LNSPTMQQKELVEQAALIIATDNMELACAFIQKTAVEKAIPEIDKRLMNEYELRKIARQE
GRQFCDQTIYTYQMDRMPEPIRLRSTVTPSQMLVYEEYARNIPGFLPSERDSTIMITKHQ
HMETSQHNVVNSFSNSQGIQGEDTSIHFDKLLLDLEQFIQAIGAQSQYNHFNTNMIILRD
CLVHTLRARDIATLQTLVQKCVESLQECLIGGQSDSDPFVVRFKEIVIRIMKTLQDPRFF
GQQWMSKFVTRVLMEGRDEYRYNIDALDTLIKSGLINLPQLDVSLAQLMDNGNNYMAVNC
AMQIAQLYLIDDRSNQFITENDLLNTIDMLAKIQSHNRAVPEGLGAIIDILRQNHETSTF
FGDRTPFGPTVHIHNGVLQVRAPNYEDPPGLVEKTDFLLREWIGIYNSQPQGRDTTKQFT
MFVHQMNVHGILKTDDLITRFFRLSTQICVETVYRSLTDKSVTMNLTRAKIYHTLDAFVK
LVALLVKHSGEANNTNTKVHLLNKVLGIVAGCLLQDHDTRVIDFHQLPYQRIFTMLFLEL
NSPEPVLETINFHVLTAFCHTLHILRPCKAAGFCYAWLELVSHRVFMGRILATTPHQKGW
PMYAQLLIDLFKYLAPFLRNAELAKPVTMLYKGTLRVLLVLLHDFPEFLCDYHYNFCDVI
PPNCIQMRNLILSAFPRNMRLPDPFTPNLKVDMLPEISYGPRILANVSIMITPAQFKKEL
DSYLKARAPVTFLSELRSNLQVSSGPGVHYNILLMNALILYVGSQAISHIRSKGHTPNMS
TIAHSAHMDIFQNLAVDLDTEGRYLFLNAIANQLRYPNSHTHYFSCTLLYLFAEANTEAI
QEQITRVLLERLIVNRPHPWGLLITFIELIKNPTYKFWSHEFVRCAPEIEKLFESVARSC
MVQKTLGQPQEPELQE
NT seq
7071 nt
NT seq
+upstream
nt +downstream
nt
atgaacctagactcgttgtcttttactttgtcacaaataagttatttagttgcatctttg
aataaaaagaaccagaaaaaagttgttacagaactaacgaagttaatttcttcgtttggc
ctggaggcggaccgtcagttgctccaatgcctattttcatcagtggaattttcagaatct
gctaataaagtcgcagctctatcaacccagaatcaagtgttactagagcagtgcacaaga
ttattggataaaccttcactaataacatctgtttgttacacagtaaataatcagatttct
aatactaagaatcttaaatttggccaacaatttttccaacagttgggcaagtgccttcgt
ctcacagctgttcaagaagttgtttttgctcttgccctacgccattcccccaacagtgaa
gtagccagtttagcacagactcatttgaaagcaagtgttccaaatttagtgcaaacctac
attgacactcaaggaagcagtaggcaacacgaaggtggtttacatgaaacatctccggaa
gttttgaacttgattttaactgcaatcttaaaatcgccgaaagaagttggactttcaaac
gatatacatcagacgttccttaatacattacaacgcgatttccctattgacttagttccg
gtagttctagcgcctctagtttaccctgaacagtgtgaattagctcccgatatgtcttcc
gatggccccggtttatccgggggtttgttagatacatcattagctgatgtcataactgaa
atgggatatagtttcacctcaagtatagaagaatgtagatccagtttggtgaaattggga
ggtcgagatataaccccttcggttatagcacgggtgttaagtattatgtgccgaacccat
agtggccttgatgacatccaacagaatagttcttttaatataaatgaagttagaacatct
tggaacatagatctatttgttcaagctgtgaaagaaactgtaccaaattttcagtggaaa
aatgttttttcagatctggatcatccagattttatgatcaaagatagacaaggtttaata
ttgttaataagtgcacttcgccaaggtctacagagtcatggatttcatcttgaaagttcc
tttcctattgaccaattttataggagatggaataatgtcgatggtcaattcagtttgata
caggcaatattgaaaaattcagatgtattctgttttgctgattatccatgcatatctgtt
gcagtagatatactgaaaacacccccagagcaagataataaagatctggctaattggaaa
tccctgaatcttgtagaattacttctaaacttatcagaatgcaatttattcagccaggtt
tttgagttgttcaagtatcctttgcacaattgcgctgatgttttagtgcttgccctacta
caaatatcaggacctgtaactgtcttacgacaagaactgctgacaagtttgatccctatt
tttcttgtaaatcatcctaattctgcaattattttacatcatgcttggcattgttcaaat
atcaacattagacctgttattatgcatgccatggcagaatggtatggtagaggagaatgc
gatcaaacaagactttccagaatattagatgttgctcaagatttgaaggctttgtcactg
ctgctaaacgctcaaaatgctcagtcttatccattcataatcgatttagcctgtttagca
tccagaagagaatatttgaagttggaaaaatggcttgcagataaaattagagaacatgga
gatccattcgtaatggcctgtgtgaagtttttgcacagaagatttccacaaatgaccggt
aaaattgaagaaccactaacgaaagcagcacctttacctacagaaacaattagtacaatg
ttattatgtttacaaaatactttgactagtgtcgggccagattgccacgaagcaattatg
tctattggtaatcagttttcgttagttctaaaaaacagaacacaaccaactatcctcaga
ccgagtggtaccttcagtacaacagctttagcaggacagttatacaatcacacatcagtg
gaatcaatttcaggtctcagtacaaacttagctaatatgactttaggagggcctcctagc
acagcttttaaccttcaaagtggattaggtcccctggttccttcaccaggttctccttct
agaatactgaatgctggaacttctaatagtccattctcaatgattcaaatgcaacatcaa
ggacctgttggtacgagttcatctttagttttaggtgttaatcaacttaacaatatcgga
agaatgggcccagcacctaccttagataaggccagactccaagattataatttgtttcct
gaaatctctcccaatgtatctaaggatattgaagatgaagcaaatagctattttcagaga
atttacaaccatccaccccatccaactttgacaattgatgaagttcttgacatgttgaaa
agatttcaagaatcaaataacaaacgtgagagagaggttttcaactgcatgctaagaaac
ctgtttgaggaatataagttttttcctcaatacccagacaaagaattgcacataactgca
caactttttggtggaataattgagagaggaattgtaacttcctatgtggcgcttggtttg
gccctacgatttgttttagatgcccttaaaaagcctgaaggttcaaaaatgtattatttt
ggtattgctgctctagatagatttaaatctcgtctgaaggagtatcataagtactgcgaa
catgtcagggccattactcattttgttgattttccaccccatctccaagagtatgtagaa
tatggattgcagagcttagagccaccttcaaaacctcagggctctactttaccagccagt
ttaacaacaatgttagcacctaatagtatgcaagttacacaaagttataaaaatacccct
gcagttagttctaatgcacctagtaaatcaagtacaacaacaacaagtacattgggatcc
cgaccatccattgctaatgcaacaaatattgataccctattggtagccacagaaaaagaa
gataaaataattgcacctccggatcctgttcaggataaaactgcattcatattcaataac
ttgagtcaactaaatttgaaaaccaaatgtgaagaactgagggaaattttacttgaagaa
tacagaccatggctgtcacagtatctggtaatgaagagagcttcaatcgaacttaatttc
catggtctctattccaattttcttgatacgttgggagttgcagaagttgtgaagctggtg
actgaagaaactcacagaaatataagagtattgctgagatcggataaagtgatagctaat
ttctcggatcgttctttattgaagaatttaggccactggttaggtattatgacattagga
agaaacaaaccgattttacagaatgatcttgatcttaagtctttgcttgttgaagcgtat
aataaagggtcccaagagttactttatgtagtgccgtttgtagcgaaagttttagaagca
tgttcaaaaagtaaagtttttaaaccgccaaatccttggacaatggccataatgaatgtt
ttagcagaattacatcaagaacaagacttgaaacttaatcttaaatttgaaattgaagtt
ctttgtaaaaatttggagatcgaagttaatcagttgaaaccatctgtttacttgaaagat
cctgaaagaattaaaaaaattgaatatcagttgtcccaacaagccaaaaaggatacctcg
atatctcaggtccacacgcaagcaccgaatctctcggagtctgaattatccaatataggt
cctgggcagcctaccaatacaactccaacatctgctactcctgcaccaccagaaccgaaa
tatagttacagtgacattcaattggcaggcatggctgctatcaatacactaacggttatc
aatcagaatattctactttttcaaacaactccacaactcaaatcggtagttaaacccgcc
attgaacgagcagttcaagaatggataggaccagtagtggacagatccatcaaaattgct
ctgcaaacatgtgaaaatataataaggaaagatttcgcattggatcctgatgaaaataga
atgcgacttgcagctcattatatggttaggaatcttactgctggaatggcaatgataact
tgcagagatcaacttctttctgcaataaacaccaactgtaaacaagctctgttaaatacg
ttgaattcaccaacaatgcaacaaaaagaactcgttgaacaagccgcgctgattattgct
actgataatatggaattggcatgtgccttcatacaaaaaaccgctgtagaaaaagctatt
cctgaaattgataagagacttatgaatgaatatgaattgaggaaaattgcaaggcaagaa
ggaagacaattttgtgatcaaactatctacacctatcaaatggatagaatgcctgaacca
attcgactaagaagcacagtaacaccaagtcaaatgcttgtttatgaggagtatgctagg
aacattcctggttttttacccagtgaacgtgacagcactattatgatcacgaagcatcaa
catatggaaacatctcaacataatgttgtaaattctttctcgaactctcaaggaattcaa
ggcgaagatacaagtatacatttcgataaattgttgttggatttggaacaattcattcag
gctataggtgcgcaaagccagtataatcatttcaacacgaatatgattatattgagagac
tgtttggtacacactttacgagcgagggatattgctactttacaaacattagttcaaaag
tgcgttgaaagtcttcaagagtgtttgataggaggacaatcggacagcgatccttttgtt
gtgagatttaaagaaatagtaatcagaatcatgaaaactttacaagatccgagattcttt
ggtcaacaatggatgagcaaatttgtaactagagtactaatggagggaagagatgagtac
cgatacaacatagatgcgctagatacccttatcaaatctggcctcataaatctgcctcaa
cttgatgtgagccttgctcaactgatggataatggcaataattacatggcagttaattgt
gctatgcaaatagctcaactatatctgattgatgaccgatcaaaccagttcataactgaa
aatgacttattgaatactattgacatgctagccaaaattcagtctcataatcgcgcagta
cctgaaggtcttggggcaataatagatattttacgacaaaatcatgagacttcaacgttc
ttcggtgacagaactccatttgggccaaccgttcatattcataatggcgtgcttcaggtg
agggccccaaattacgaagatcctcctggtcttgttgaaaaaactgactttcttttgaga
gagtggattggaatctacaattcccaacctcagggtagggatactaccaagcaatttact
atgtttgttcatcaaatgaatgttcatggtatcctcaaaactgatgacttgatcactaga
tttttccgtttatctacccaaatatgcgtagagactgtgtacagaagcctgactgataag
tcagtgacaatgaacttgacaagagcaaagatttatcacaccttagatgcctttgtaaaa
ttggttgccctattagtaaaacattctggtgaagccaataatacaaataccaaagtgcat
ctgctgaacaaagttttgggtattgtagctggctgtttacttcaagaccatgatacaaga
gtgatagacttccatcaactaccttatcaaagaattttcacaatgctctttttggaactc
aattctcccgaacctgttctcgagacgatcaacttccatgtcttaacggccttttgtcat
accctgcatatattaagaccatgtaaagccgctggattttgttatgcttggctggaacta
gtcagtcatagagtatttatgggaagaattcttgctacaacaccacatcaaaaaggctgg
ccaatgtacgcgcaattactcattgacctgttcaaataccttgcacccttcctcaggaac
gctgaattagcaaaacctgttacaatgttgtataaaggaacactgagggtcttgttagtc
cttttacatgactttccggagttcttgtgtgactatcattataatttctgtgatgttatt
ccacctaattgtattcaaatgaggaatttaattttgtcggcattccctaggaatatgagg
ttgccagacccatttaccccaaatttaaaagtggacatgttgcctgaaatatcttatggt
cctcgtattctagcaaatgtatcgataatgataacacctgcacagttcaaaaaagaactt
gattcttaccttaaggctcgtgctccagtaacattcctttcagagttgagaagtaattta
caagtttccagcggacctggagtccactataacattcttttgatgaatgcactcatactt
tacgtagggagtcaggctatttcacacatccgcagtaaaggccacacccctaacatgtca
acaatagcgcacagtgctcatatggacatcttccaaaacctggcagttgatttggacact
gaaggaagataccttttcttgaacgccattgcgaaccaattacgatatccaaatagccac
actcattacttctcttgtacgttgttgtatttgttcgctgaagcaaacacagaggctata
caagaacaaataactagagtcctccttgaaagactgatagtaaacaggccacatccctgg
ggattacttatcactttcattgaactaataaaaaatcctacatataaattttggagccac
gaatttgttcgatgtgcaccagaaattgaaaagttatttgaatctgtggccagatcatgt
atggttcagaaaactttaggacaaccacaggagccagaactgcaagaatga
DBGET
integrated database retrieval system
