KEGG   Haemophilus sp. oral taxon 036: C3V42_01545
Entry
C3V42_01545       CDS       T05707                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
hay  Haemophilus sp. oral taxon 036
Pathway
hay02024  Quorum sensing
hay03060  Protein export
hay03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:hay00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    C3V42_01545
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    C3V42_01545
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    C3V42_01545
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hay02044]
    C3V42_01545
Enzymes [BR:hay01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     C3V42_01545
Secretion system [BR:hay02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   C3V42_01545
  Eukaryotic Sec-SRP protein
   C3V42_01545
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA Zeta_toxin AAA_22 AAA_30 AAA_31 cobW AAA_33 AAA_24 YqeC T2SSE AAA_16 APS_kinase AAA_14 AIP3 Rad17 TsaE KTI12 ATP_bind_1 ABC_tran AAA_19 Fe-ADH_2 Thymidylate_kin
Other DBs
NCBI-ProteinID: AVM59396
LinkDB
Position
complement(320378..321766)
AA seq 462 aa
MFDNLSDRLSKTLRNITGKGRLTEDNIKETLREVRMALLEADVALPVVREFIAKVKERAL
GEEVNKSLTPGQEFLKIVQRELEKAMGEANESLNLATQPPAVILMAGLQGAGKTTSVGKL
AKFLRERHKKKVLVVSADVYRPAAIKQLETLAQSVGVDFFPSDVKQNPVDIAKSALADAK
LKFYDVLIVDTAGRLHVDTEMMDEIKQVHAALNPIETLFTVDAMTGQDAANTAKAFNEAL
LLTGVILTKVDGDARGGAALSIRQITGKPIKFLGVGEKTEALEPFHPDRIASRILGMGDV
LSLIEDLERSVDREKAEKMAQKFKKGDDFTLDDFREQLIEMKKMGGMMSMLEKLPGAKNL
PDHVKNQVDDKMFVKMEAIINSMTLKERANPDIIKGSRRRRIALGSGTQVQDVNKLLKQF
DEMQRMMKKMRKGGMAKMMRGMQGLMGGGLGGLGGLGGMFKR
NT seq 1389 nt   +upstreamnt  +downstreamnt
atgtttgataatttatcggatcgcctttctaaaactttacgcaatatcacgggaaaaggc
cgtttaacggaagataatattaaagaaaccttacgcgaagtgcgtatggcattacttgaa
gcagatgttgctttacctgtggtgcgtgaatttatcgcaaaagtaaaagaacgcgcgctt
ggggaagaagtcaataaaagcttaacgccggggcaagagttcttaaaaatcgttcagcgt
gagcttgaaaaagccatgggtgaagcgaatgagagtttaaacctagcaactcaaccacca
gcggttatcttaatggcgggtttacaaggtgcgggtaaaaccaccagcgtgggtaaatta
gcaaaattcttgcgtgaacgccataaaaagaaagtgttagtagtttctgccgacgtatat
cgcccagctgcgattaagcagcttgaaactttggctcagtccgttggcgtggattttttc
ccatcggatgttaaacaaaacccagttgatattgctaaatcggcacttgctgatgcaaaa
ctgaaattctacgatgtattgattgtggatacggcagggcgtttgcacgttgatacagaa
atgatggatgaaatcaagcaagtccatgcagcgttaaatccaatcgaaacccttttcacc
gtagatgcgatgactggtcaagatgcagccaatacggcaaaagcctttaatgaagcattg
ctgcttacaggtgttattttgacaaaagtggacggtgatgcacgcggtggtgcggcgtta
tcaattcgtcaaatcactggtaaaccaatcaaattcttgggtgtgggtgagaaaacagaa
gcgcttgagccgttccatccagaccgtatcgcttcccgtattttgggtatgggcgatgtg
ctttcactgattgaagatcttgaacgttctgttgaccgtgaaaaagcagaaaaaatggcg
cagaaattcaagaaaggcgatgatttcactttagatgatttcagagaacagcttatcgag
atgaaaaaaatgggtggcatgatgtctatgcttgagaaattacccggtgcaaaaaatttg
cctgatcacgttaaaaatcaagtggatgacaaaatgtttgtcaaaatggaagcgatcatt
aactctatgaccttaaaagaacgtgccaacccagatattatcaaaggatctcgccgtcgt
cgtattgcattaggttctggcactcaagtgcaagatgtcaataaattacttaaacaattc
gatgaaatgcaacgtatgatgaagaaaatgcgtaaaggtggcatggctaaaatgatgcgt
ggaatgcaaggcttaatgggcggaggcttgggcggtcttggtggtttaggcggaatgttt
aaacgataa

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