Haemophilus sp. oral taxon 036: C3V42_03635
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Entry
C3V42_03635 CDS
T05707
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
hay
Haemophilus sp. oral taxon 036
Brite
KEGG Orthology (KO) [BR:
hay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hay03032
]
C3V42_03635 (gyrB)
03400 DNA repair and recombination proteins [BR:
hay03400
]
C3V42_03635 (gyrB)
Enzymes [BR:
hay01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
C3V42_03635 (gyrB)
DNA replication proteins [BR:
hay03032
]
Prokaryotic type
DNA Topoisomerases
C3V42_03635 (gyrB)
DNA repair and recombination proteins [BR:
hay03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
C3V42_03635 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
HATPase_c
Toprim
GyrB_hook
HATPase_c_3
DUF6865
Motif
Other DBs
NCBI-ProteinID:
AVM59771
LinkDB
All DBs
Position
complement(741335..743755)
Genome browser
AA seq
806 aa
AA seq
DB search
MSETTNDNYGASSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHC
SDIIVTIHDDNSVSVQDDGRGIPVDIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLH
GVGVSVVNALSDKLQLTIRRQGHVHEQFYHLGEPQAPLTVIGDTEATGTTVRFWPSSDIF
AITTFDYKILAKRLRELSFLNSGVSIRLIDKRDGSEDHFHYEGGIQAFVEYLNKNKNPIH
PKPFYFTAEKDGIGVEVALQWNDGVNENVYCFTNNIPQRDGGTHLAGFRGALTRSLNSYM
ENEGMLKKEKVATSGDDAREGLVAIISVKVPDPKFSSQTKDKLVSSEVKSAVESAMNEKM
QEYLLENPADAKIIVNQIIMAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPAL
SELYLVEGDSAGGSAKVGRDRKTQAILPLKGKILNVEKARFDKMLSSQEVGTLITALGCG
IGRDEYNPDKLRYHHIIIMTDADVDGSHIRTLLLTFFYRQMPELIERGYVYIAQPPLYKV
KKGKQERYIKDADEMEQYELTLALDGAELHISANAPAMNALVFEKLVAEYNSVQKLISRL
SRHYPTPVLQGLIYQSPISVEMMKDESAVENWGKSFVEQLTAKETEAHQYSVRTQFNAER
QVYEAVITVRKHGIDTDYFLNFDFVHGNEYAKIVSLNKQLNGLLEEGAYVTRGEKVQPVR
SFEQAVEWLVKESRKGLEVQRYKGLGEMNADQLWETTMDPNSRRMLKVSIKDAVAADQLF
TTLMGDEVEPRREFIELNALRANLDI
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaacgaccaatgataactatggtgcatcgagcattaaagtattaaaaggcctt
gatgcggtgcgtaaacgtccaggtatgtatatcggtgatactgatgatggtactggtttg
caccatatggtatttgaagtggtggataatgccattgatgaagccctcgctggccattgt
tccgatattatcgtgacaattcatgatgataattctgtatcggtacaagatgatgggcgt
ggtattcctgtggatattcaccctgaagaaggcgtttctgcagcagaagttatcatgacc
gtgcttcacgctggcggtaaatttgacgataactcttataaagtatcgggcggtttacac
ggtgtaggtgtatcagtggtgaatgcgctttctgataaattacagttaaccattcgtcgt
caaggtcacgttcatgagcaattctatcatttaggtgagccacaagcgccattaacagtg
attggtgacacagaggcaacggggacaacggttcgtttctggccaagctcagatattttt
gctatcacaacctttgattacaaaatcttagcaaaacgcttacgtgagctttctttcttg
aactcaggcgtatctattcgtttaatcgataaacgtgatggctctgaagatcatttccat
tacgaaggcggtattcaagcatttgtcgaatatttgaataaaaataaaaacccaattcat
ccaaaaccattttattttaccgctgagaaagatggtatcggtgtagaagttgccttgcag
tggaatgatggtgtaaatgaaaacgtgtattgcttcaccaataacattcctcaacgtgat
ggcggtactcacttagcaggtttccgtggggctttaacccgtagtttaaatagctatatg
gaaaacgagggtatgctgaaaaaagaaaaagtggcgacttcaggcgatgatgcgcgtgaa
ggtttagttgcgattatttcagttaaagtgcctgatccaaaattctcatcgcaaacgaaa
gacaaactcgtgtcttcagaagttaaaagtgcggtggaatctgcgatgaatgaaaaaatg
caggaatatttattggaaaatccggcagatgcaaaaatcattgtaaatcaaattattatg
gccgctcgtgcgcgcgaagcagcacgtaaagctcgtgaaatgacgcgtcgtaaaggggcg
ttagatattgcaggtttaccaggtaaacttgcagactgccaagaaaaagatcctgcactt
tctgaactttacttggtggagggggactccgcaggtggttctgcaaaagttggtcgcgat
cgtaaaactcaagcaattttgccattgaaaggtaaaatcttaaacgtagaaaaagcacgt
tttgacaaaatgttgtcttcccaagaggtgggaacattgattactgccttaggttgcggt
attggtcgtgatgaatataacccagataaattacgctatcatcatatcattatcatgact
gatgctgatgtggatggttctcacattcgtacgttgcttttaacgtttttctatcgtcaa
atgcctgagcttattgaacgtggttatgtttacattgctcagccgccactttacaaagtg
aaaaaaggaaaacaagaacgctacattaaagatgcggatgaaatggagcaatatgaatta
acgcttgcgttagatggcgcagaattacatatcagcgcaaatgcaccagcaatgaatgct
cttgtatttgagaaattggtggcagaatataacagcgtacaaaaacttatcagtcgttta
agtcgccactatccaactcctgtgttgcaaggattaatttatcagtcgccaatttctgtt
gaaatgatgaaagacgaaagtgcggtggaaaattggggtaaatcttttgttgaacaactg
actgcaaaagaaacagaagcacatcaatattcagtgcgtacacaatttaacgcggaacgc
caagtatatgaagcggtgattacggttcgtaaacacggtattgataccgattatttctta
aattttgattttgttcacggcaatgaatacgcgaaaattgtttctcttaataaacaactc
aatggtttattggaagaaggcgcttatgttactcgtggtgaaaaagtacaaccagtgcgt
agctttgaacaagccgttgaatggctggtaaaagaatctcgtaaaggccttgaagttcaa
cgttataaaggacttggtgaaatgaacgcagatcaactttgggaaactacaatggatcca
aattcacgtcgtatgttgaaagtttctattaaggatgctgttgcagcggatcaactcttc
acgaccttaatgggagatgaagttgagccacgccgtgagttcattgagctgaatgcgtta
agagcaaatttagatatttaa
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