Halomonas beimenensis: BEI_2023
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Entry
BEI_2023 CDS
T05125
Name
(GenBank) uracil-DNA glycosylase, family 1
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
hbe
Halomonas beimenensis
Pathway
hbe03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hbe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BEI_2023
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hbe03400
]
BEI_2023
Enzymes [BR:
hbe01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
BEI_2023
DNA repair and recombination proteins [BR:
hbe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BEI_2023
Prokaryotic type
BEI_2023
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ATJ83010
UniProt:
A0A291P7Z0
LinkDB
All DBs
Position
complement(2121151..2121837)
Genome browser
AA seq
228 aa
AA seq
DB search
MNCPLPDSWQAVLGAEFEAPYMRALRDFLAAEKAARKVIYPHSSHWFRAFELTPLHEVRV
VILGQDPYHGPGQAHGLCFSVRPGVRIPPSLLNVYKELAADVGFTPVDHGNLEHWARQGV
LLLNTSLTVEQGNAGSHRGKGWETFTDRAIAAVNEHAGPTVFLLWGSHARQKKALVDTRR
HLVLESPHPSPLSAHRGFFGNHHFSRANAFLAEQGRGTIDWQLPATPA
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgaactgtccgcttcccgacagctggcaggccgttctcggcgcggagttcgaggcgccc
tacatgcgggcgctgcgggacttcctggccgccgagaaggccgcgcgcaaggtcatctac
ccgcattcctcgcactggttccgggccttcgagctgaccccgttgcacgaggtccgggtg
gtgatcctgggccaggatccctaccacggtcccggccaggctcacgggttgtgcttctcg
gtgcggcccggggtgcgcatcccgccgtccctgctcaacgtctacaaggagctcgccgcc
gacgtcggcttcacgcccgtcgatcacggcaatctggaacactgggcccgccagggggta
ttgctgctcaacacctcgctgacggtggagcagggcaatgccggctcccaccggggcaag
ggctgggaaaccttcaccgaccgggccatcgccgcggtcaacgaacacgccggccccacg
gtcttcctgttgtggggcagccatgcccgccagaagaaggccctggtcgacacccgtcgc
catctggtcctggagtcgccgcatccctcgccgctctcggcccatcgcggcttcttcggc
aaccaccacttctcccgggccaacgccttcctcgccgagcagggccgcggcaccatcgac
tggcagctgcccgccacccccgcgtga
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