Humisphaera borealis: IPV69_11030
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Entry
IPV69_11030 CDS
T07075
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
3.6.4.13
]
Organism
hbs
Humisphaera borealis
Pathway
hbs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hbs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IPV69_11030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hbs03019
]
IPV69_11030
03009 Ribosome biogenesis [BR:
hbs03009
]
IPV69_11030
Messenger RNA biogenesis [BR:
hbs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
IPV69_11030
Ribosome biogenesis [BR:
hbs03009
]
Prokaryotic type
rRNA helicases
IPV69_11030
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
QOV91847
UniProt:
A0A7M2X262
LinkDB
All DBs
Position
2973224..2974897
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AA seq
557 aa
AA seq
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MSDKTEHPPVPEAFAALGVRNSILRGLAEAKFVTPSEIQALLIPRALTGVDILGQARTGT
GKTAAFGIPVLQKATRGVATQAIILVPTRELCVQVESELKRLAQFTPIRVVAVYGGQRIS
AQMKFLKSGPEILVGTPGRVIDLLDRRIIRFENVRFVILDEVDRMLDIGFRDDIRNILSR
VRGMKRRLPPDAREGQADDGGDGGDNSYRQDDRDDRQNDQREDRSARSDSGPIQAMAGYF
DDDDAAAEGDDREGSDRDGNDRDGDRKETKPSRKAPQAEDDHVEGPVAAGHQTIFVSATI
SDEIERLARRYMRDPEKLIAPGADDKPTVEKVEQFFFAVEPWDKYRLLKMLLERENPDLA
IVFCRTKHGAEKLAKRLHGDGIECREIHGNLNQNQREKVMKNFRTGKFDILVATDLASRG
IDVADISHIVNYDLPDDPEVYVHRVGRTARMGAKGKAYTFVSRGQGPELTKVENLINMVI
HQGQLEGWQPNPQPADWKEGKPGGFGGGGGFGGGGGNGGGSPQTPAAPVTDHPAVPLPPP
RRLGSKLPLSRRHKRLR
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgataaaaccgaacacccgcccgtccccgaggcttttgccgcactcggagtccgt
aattccatcctccgcggcctggccgaggcgaagtttgtcacgccttcggagatccaggca
ctgctgatcccgcgcgcgctgacgggggtggatattctcggccaggcccgcaccggcacc
ggcaagactgccgcctttggcatcccggtgttgcagaaggcaacccgtggcgtcgccacg
caggcgatcatcctcgtgccgacgcgcgaactgtgcgtgcaggtggaatcggagctcaag
cggctcgcccagttcacgcccatccgcgtggtcgcggtctacggcggacagcgcatcagc
gcgcagatgaagttcctcaagagcggcccggagattctcgtcggcacgcctggccgcgtg
atcgacctgctcgaccgccgcatcattcgatttgaaaacgtccggtttgtgattctcgac
gaagtggaccggatgctggacatcgggtttcgcgacgacattcgaaacatcctgtcgcgc
gtccgcggcatgaaacgccgcctcccgcccgacgcccgcgaaggccaggccgacgacggt
ggtgacggcggcgacaacagctatcggcaggacgatcgggacgaccgccagaacgaccag
cgcgaagaccgatccgcccgaagcgattccggccccatccaggcgatggccggctacttc
gacgacgacgatgcggcagcggaaggtgacgatcgtgaaggcagtgatcgcgacggcaac
gatcgcgacggcgaccgaaaagaaaccaagccgtcccgcaaggccccgcaggccgaggac
gaccacgtcgagggacccgtcgccgcgggtcaccagacgatcttcgtctcggcgacgata
tccgacgagatcgaacgcctcgcccgccggtacatgcgcgacccggaaaagctgatcgcc
cccggcgccgacgacaagccgaccgtcgagaaggtcgaacagttcttcttcgcggtcgaa
ccgtgggacaagtaccgcctgctgaagatgctgctggagcgcgagaaccccgacctggcg
atcgtgttctgccgcacgaagcacggtgccgagaagctggccaagcggcttcatggcgac
ggcatcgagtgccgcgagatccacggcaacctgaaccagaaccagcgcgaaaaggtgatg
aagaacttccgcaccggcaagttcgatatcctggtcgcgaccgacctggccagccgcggc
atcgacgtcgccgacatcagccatatcgtgaactacgacctgccggacgaccccgaggtg
tacgtccaccgcgtgggccgaaccgcccgcatgggtgccaagggcaaggcgtacacgttt
gtttcgcgcggccagggcccggaactgaccaaggtggagaacttgatcaatatggtcatc
caccagggacagttggaaggctggcaacccaatccccagcccgccgactggaaagaaggc
aagcccggcggatttggtggcggtggtggatttggcggcggtggtggcaatggcggtgga
tcgccccagacacccgccgccccggtcaccgaccaccccgcagtccccctgcccccgccg
agaagactgggcagcaagctgcccctgagccgacggcacaagcgactgcggtga
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