Helicobacter cinaedi CCUG 18818 = ATCC BAA-847: HCBAA847_0806
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Entry
HCBAA847_0806 CDS
T02494
Symbol
gidA
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification enzyme
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
hcb
Helicobacter cinaedi CCUG 18818 = ATCC BAA-847
Brite
KEGG Orthology (KO) [BR:
hcb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hcb03016
]
HCBAA847_0806 (gidA)
03036 Chromosome and associated proteins [BR:
hcb03036
]
HCBAA847_0806 (gidA)
Transfer RNA biogenesis [BR:
hcb03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
HCBAA847_0806 (gidA)
Prokaryotic type
HCBAA847_0806 (gidA)
Chromosome and associated proteins [BR:
hcb03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
HCBAA847_0806 (gidA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
SAM_GIDA_C
GIDA_C_1st
FAD_oxidored
Pyr_redox_2
FAD_binding_2
AlaDh_PNT_C
Pyr_redox
HI0933_like
Motif
Other DBs
NCBI-ProteinID:
BAM32044
UniProt:
A0AAI8MMJ9
LinkDB
All DBs
Position
complement(776986..778884)
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AA seq
632 aa
AA seq
DB search
MEYDVLVVGGGHAGLEASIASAKMGAKTHLLTLLIQNIALASCNPAVGGLGKGHLVKEID
ALGGVMGEITDKCGIQFRILNSSKGPAVRGTRAQIDMDRYSIIAKDIALNTPNLTLSQES
VESLIYEQDSQGRFIAKGVKTNIGKTYYAKAVILTTGTFLRGLVHIGESKIQNGRFGEMS
PQNLSTSLQELGLSLGRLKTGTCARIDGRSIDFSRLETHSGDSNPPHFSHKTKDFAPTQL
PCFVTYTNEKTHNIIRSNFHRAPLFTGQIEGVGPRYCPSIEDKINRFADKERHQLFLEPQ
TQEAVEYYINGLTTSLPIDVQEEMIHSIEGLENAHITRYGYAIEYDYVEPTELYHTLETK
KCANLFLAGQINGTTGYEEAAAQGIMAGINAALSLKGESFSLARNEAYIGVMIDDLVTKG
TKEPYRVFTSRAEYRLLLREDNAYLRLVPYAFALGLVTKEYYEKTMQDKEHIINTMNYLQ
NNYLTPSQISLDMLKSLNLSPISDKTLLIHIIGREELEPHRLRTLLAKCGVENVESMSEK
AIEQIFIESKYFDYIQKQKEQIGQMEQMLQVEIPRDFVFDKIPGLSLEVIEKLKKFTPKS
LFEASEISGITPASIDVLHLYIHLHHKKSALV
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggaatatgatgttttagtcgtgggtggcggacacgctgggctagaagcaagtatagca
agtgcgaaaatgggtgcaaaaacacatctgcttacacttttaattcaaaatatcgcccta
gcaagttgtaatcccgcagtaggtgggcttggcaaagggcatttagtaaaagagatagac
gcattagggggagttatgggggagattaccgataaatgcgggattcaatttagaatctta
aactcctccaaaggtcctgctgtgcgtggcacaagagcgcaaattgatatggatagatat
agcattatcgctaaagacatagccctaaacaccccaaatctcacgctctcacaagaaagc
gtagaatcccttatctacgagcaagattcacaagggcgatttatcgctaaaggtgtgaaa
acaaatatcggcaagacttattatgcaaaggcggtgattcttaccacagggacttttttg
cgtgggctagtgcatattggggagagcaagattcaaaatggacgctttggcgagatgagt
ccgcagaatcttagcacttccttgcaggagctaggcttgtctctagggcggcttaaaaca
gggacttgtgctaggattgatgggcggagtattgatttctcacgccttgaaacgcatagt
ggtgatagcaaccctccgcattttagccataaaacaaaagattttgctcccacacaactg
ccctgctttgtaacctacacaaatgaaaaaacgcataatattatccgtagcaacttccat
cgtgcaccgctttttacagggcagattgagggtgtgggaccgcgatactgcccaagtatt
gaagataaaatcaaccgctttgccgataaagagcgacatcagcttttcttagagcctcaa
acacaagaagcggtggaatattacattaatggacttacaacttcactgcctattgatgtg
caagaggagatgattcatagcattgaagggctagaaaacgcccatattacgcgatatggc
tacgccatagagtatgattatgtagagccaaccgagctttaccacacactagagactaaa
aaatgtgcgaatcttttcttagccgggcagattaatggcacaacaggctatgaagaagcc
gccgctcaaggcattatggctggaatcaacgctgccctttcattaaagggggaatctttt
agcctagcacgaaatgaagcctatataggcgtgatgattgatgatttggtaacaaaaggc
acaaaagagccctatcgtgtttttacctctcgtgcggagtatcggctgcttttgcgtgag
gataatgcgtatttgcggcttgtgccttatgcgtttgctttgggcttagttacaaaagaa
tattatgaaaaaactatgcaagataaagagcatatcataaacacgatgaactatttacag
aataattaccttaccccatcgcaaatctcacttgatatgctaaaatcgcttaatctctcg
cccattagtgataaaactttacttatacatattatcggtcgcgaagagctagaacctcat
agacttaggactcttctagcaaaatgtggggtagaaaatgtagaatctatgagcgaaaag
gcgattgaacaaatattcatagaatctaaatattttgactatatccaaaagcaaaaagag
caaattgggcagatggagcaaatgctacaagtggagattccacgggattttgtatttgat
aagattcccggacttagccttgaagtgatagaaaagctcaaaaaattcacaccaaagagc
ctttttgaagcaagtgagattagcggtatcactcctgcaagcattgatgtcctgcatttg
tatatccatttacatcataaaaaatcagctttggtataa
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