Hymenobacter cellulosivorans: MUN80_09360
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Entry
MUN80_09360 CDS
T09419
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
hcf
Hymenobacter cellulosivorans
Pathway
hcf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MUN80_09360 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcf03019
]
MUN80_09360 (rny)
Messenger RNA biogenesis [BR:
hcf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MUN80_09360 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_PNO1_2nd
KH_KhpA-B
DUF4954
NttC
KH_2
ATG17_like
Motif
Other DBs
NCBI-ProteinID:
UOQ54947
UniProt:
A0ABY4FG64
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Position
2208715..2210412
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AA seq
565 aa
AA seq
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MPDILYIILAAVLALGVGIVVGRQLAGKARLDHEADAKARAQQIIQEAEAQATRTRDERI
QQSKDKFRQLKNEFEQESKRQKQELESELTQRRQGVVEQEQSIKQLTLTTQRQLEQIQKK
EQDMDALREKLQNDSQQQRERLEAQEEKRRTIVENQLAKLQQREQEIEEELESTRESLNA
QLTQVQHQLETISGLTAAEAREQLVESLKNEAQIQASSYIKDVVAQAKLSATKDAKKVVL
ETIQRTAAEHAIENCVSIFNIESDDVKGKIIGREGRNIRALEAATGVEIIVDDTPEAIII
SGFDPVRREVARLSLHLLVKDGRIHPARIEEIVAKTRKNIDEEIVEIGERTIIDLGIHGL
HPELIKMVGRMRFRSSYGQNLLQHSREVANLCATMAAELGLNVKHAKRAGLLHDIGKVST
EEPELPHAILGMEMAKKYKEHPDVVNAIGAHHDEIEMTAMISPLVQACDAISGSRPGARR
EMMESYIKRLKQLEETAVSFDGVLQCYAIQAGRELRVMVNADNVTDERAQELSYEISQKI
EKEMQYPGQIKITVIREMRAVAYAK
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgcccgacattttgtatatcatcctggccgccgtgcttgcccttggggtcggcattgtg
gtcggcaggcagctggccggcaaggcccgcctggaccacgaggccgacgccaaagcccgc
gcccaacagatcatccaggaggccgaagcccaggccacccgcacccgcgacgagcggatt
cagcagtcgaaagacaaattccgccagcttaagaacgaattcgaacaggaaagcaagcgc
cagaagcaggagctcgaatccgaattgacccagcgccgccaaggtgtagtagagcaggag
caaagcattaagcagcttacccttaccacccagcgccagctcgagcagattcagaagaaa
gagcaggacatggacgccctgcgcgaaaagctccagaacgattcgcagcagcagcgcgaa
cggctggaagcccaggaggaaaagcgccggactatcgtggaaaaccaactggccaagctc
cagcagcgtgagcaggaaatcgaggaggagctggaaagcacccgtgagtcgctcaacgcc
cagctcacgcaagtgcagcaccagctggaaacgatttcgggcctgaccgccgccgaagcc
cgtgagcagctagtggagtcgctcaagaacgaagcccagattcaggccagctcctacatc
aaggatgtggtggcccaggccaagctttcggccaccaaagacgccaagaaagtcgtgctc
gaaactattcagcgcaccgccgccgagcatgccattgaaaactgcgtgtccatcttcaac
atcgagtcggacgatgttaaagggaaaatcatcggccgcgagggccgcaacatccgcgcc
ctggaagccgctactggcgtcgaaattatcgtcgacgatacgcccgaggccatcatcatc
tctggcttcgacccggtgcgccgcgaagtagcccgcctctcgctgcacttgctggtgaaa
gacggccggattcacccggctcgcatcgaggaaatcgtggctaagacccgcaagaacatc
gacgaggaaatcgttgaaatcggcgagcggaccatcatcgacctgggcattcacggcctg
caccccgagctcattaagatggtgggccgcatgcgcttccgctcgtcctatgggcaaaac
ctactccagcactcgcgcgaagtagctaacctctgcgccacgatggctgccgagctgggc
ctgaacgtgaagcacgccaagcgtgccggcctgctccacgacatcggcaaagtaagcacg
gaggagcccgaactgccccacgccatcctgggcatggagatggccaagaaatacaaggag
catcccgacgtagtcaacgccattggcgcccaccacgacgaaatcgagatgacggccatg
atttcgcccctcgtgcaggcctgcgacgccattagcggctcccgccccggcgcccgtcgc
gagatgatggaaagctacatcaagcgcctcaagcagctcgaagaaactgctgtgtcattc
gacggtgtgctgcagtgctacgccattcaggccggccgcgagttgcgcgtgatggtcaac
gccgacaacgtcactgacgagcgtgcccaggagctgagctacgaaatctcgcagaagatc
gagaaggaaatgcagtaccccggtcagatcaagattactgtaatccgggagatgcgcgcc
gtagcctacgccaagtag
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