Hemicordylus capensis (graceful crag lizard): 128335891
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Entry
128335891 CDS
T08891
Symbol
TRPV1
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
128335891 (TRPV1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hcg04040
]
128335891 (TRPV1)
Ion channels [BR:
hcg04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
128335891 (TRPV1)
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GFIT
Motif
Pfam:
Ank_2
Ank
Ank_5
Ion_trans
Ank_3
PKD_channel
Motif
Other DBs
NCBI-GeneID:
128335891
NCBI-ProteinID:
XP_053130688
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Position
12:9749442..9778695
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AA seq
832 aa
AA seq
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MSGILGKMRKLGSSDLEDSDTTDDHAEGEDGVPMAGTLKATKHSIFARRARFGIGDGDKD
MAPMDSFYQMDHLDSSPIIKFSLSMERGKCGNHCPKLVSTASIGARVEKTFKLYDRRRLF
DAVAHGDPSELDDLLLYLLQTTKRLTDDEFKEPDTGKTCLLKAMLNLHDSRNDTIPLLME
VAEKTDNLKEFVNAEYTDSYYKGQTALHIAIERRNIYLVNLLVKNGADVHARAHGEFFQK
IKGRPGFYFGELPLSLAACTNQLNIVKYLLENPYQQANIAAQDSMGNTVLHALVEVADNT
DDNTKFVTKMYNDILILGARCHPTLKLEEITNRRGLAPLTLAVETGKIQIFAYILRREMK
EPECRHLSRKFTEWAYGPVHSSLYDLSSIDTCEKNSVLEIIAYSSETPNRHEMLLVEPLN
QLLQDKWDRFVKHLFYLNFIVYATHILILTVAAYYRPTRKHGKPPFAFNQTTGEYFRITG
ESLSVLGGAYFFFRGIKYFQQRRPSLKAFLTDSYSEALFFLHSLLLLGAVVLYFCGQEHY
VVFVVFSLAIGWTNLLYYTRGFQQMGIYSVMLEKMMLRDLCRFIVVYLLFHLGFSTAVVT
LIEEDDEGQDPNQTGSICSCCPTKRHLRSYNNLYSTCLELFKFTIGMGNLEFTENYHFKP
VFVSLLVLYVILTYILLLNMLIALMGETVNKIAQESKSIWKLQRAITILNIENSYWNCIV
NPFRSGKRVLVGTTPDGKDDYRWCFRVDEVNWSTWNTNLGIINEDPGGYSEELKRNLSFS
FKASRVSGKNWKTLVPILRDGKREGSLKPISEDDVDSEGQEIRKKSLPNPVL
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgtcagggatcctggggaagatgaggaaactcggaagctcggacctggaggattcggac
accactgatgaccacgcagagggcgaagatggcgtgcccatggcaggcacactgaaggcg
accaagcacagcatctttgcacggcgggcacgctttgggatcggagatggagacaaggac
atggcccccatggactctttctaccagatggaccacctggactccagtcccatcatcaag
ttcagcctcagcatggaaagagggaagtgtggcaatcattgccccaagctggtgtccacc
gcttccatcggtgcgcgtgtcgagaagacattcaagctgtatgaccggaggaggctcttc
gacgcggtggcccatggcgatcccagtgagctggatgaccttctgctctatctgctgcag
acgacgaaacgcctgactgatgacgagttcaaagagccggacactgggaagacgtgcttg
ctgaaggccatgctgaacctgcacgacagccggaacgacaccatcccgctcttgatggag
gtggcagagaagaccgacaacctgaaggagtttgtgaatgcggagtataccgacagctac
tacaagggtcaaaccgcgctccacatcgccatcgagagacggaacatatacctggtcaac
ctcctggtcaagaacggagcggacgtccatgcgagagcccacggggagttcttccagaag
atcaaagggaggcccggattttattttggggagctccctctctcgctggccgcctgcacc
aaccagctcaacatcgtgaagtatctgctggagaacccctaccagcaggccaacatcgcc
gctcaggactccatgggcaacaccgtgctccacgccctggtggaggtggcagacaacacg
gacgacaacaccaagtttgtcaccaagatgtacaacgacatcctcatcctgggggccagg
tgccaccccaccctcaagctggaggagatcaccaaccgcaggggcctggccccgctgact
ctggcggttgagaccgggaagatacagatctttgcctacatcctccggcgagagatgaag
gagccggagtgccgtcacctctcccggaagttcaccgaatgggcttacgggccggtccac
tcgtcgctctatgacctctccagcatcgacacctgcgagaaaaactccgtcctcgagatc
attgcctacagcagcgagacgccgaaccgtcacgagatgcttctggtggagcccctgaat
cagcttctgcaggacaagtgggaccggtttgtcaagcacctcttctacctgaactttatc
gtttatgccacgcacatcctcatcctgaccgttgccgcctactaccggcccacgaggaaa
cacgggaagcctcccttcgcgtttaatcagacgaccggtgaatatttccgcatcaccgga
gaaagcctgagcgttctgggaggcgcctatttctttttcagagggatcaagtatttccag
cagagacgcccatctctgaaggcattcctcacagacagctacagtgaagcccttttcttc
ctccactcgctgctcctcctgggggctgtcgtgctgtacttctgtgggcaagagcactac
gtggtcttcgtggtcttctccctggcgatcggctggaccaacctgctgtattacacccgc
ggcttccagcagatggggatctactcggtcatgctggagaagatgatgctgagggacttg
tgccgcttcattgtcgtctacctgctgttccatctggggttttcaacagccgtggtgacc
ctcattgaggaggacgacgaggggcaggacccaaaccagacaggcagcatctgctcctgc
tgcccgaccaagcgccacttgcgctcttacaacaacctctattccacctgcctggagctc
ttcaagttcaccatcgggatgggcaacctggagttcacggagaactatcacttcaagccc
gtcttcgtcagtctgctggtgctctacgtcatcctcacctacatcctgctcctcaacatg
ctcatcgccctgatgggggagacagtcaacaagatcgcccaggaaagcaagagcatctgg
aaactccagagagccatcaccatcttgaacattgagaacagctactggaactgcattgtc
aaccccttccggtccgggaagcgggttttggtggggacgactccagacggcaaggacgat
taccggtggtgcttcagggtggacgaggtgaactggtccacgtggaacaccaacttgggc
atcatcaatgaagaccccgggggatacagcgaggagctgaaacggaacctgagcttctct
ttcaaggccagccgagtttcaggaaaaaactggaagacgctggtcccgattctgagagac
ggaaaacgagagggctcactcaaacccatttcggaagacgatgttgattcggaaggccaa
gaaatccggaagaaatcgcttcccaaccccgtgttatga
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