Hemicordylus capensis (graceful crag lizard): 128336459
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Entry
128336459 CDS
T08891
Symbol
IFT140
Name
(RefSeq) intraflagellar transport protein 140 homolog
KO
K19672
intraflagellar transport protein 140
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
hcg03037
]
128336459 (IFT140)
Cilium and associated proteins [BR:
hcg03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
128336459 (IFT140)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_IF140-IFT172
Beta-prop_IFT140_1st
Beta-prop_IFT140_2nd
TPR_IF140_C
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR19_1st
ANAPC4_WD40
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WD40_Prp19
Beta-prop_HPS5
Beta-prop_EML
TPR_IFT80_172
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_WDR75_1st
TPR_GEMI5
Beta-prop_CAF1B_HIR1
TPR_COPA_B
Beta-prop_WDR35_TULP_N
WD40_MABP1-WDR62_1st
MTPAP-like_central
WD40
tRNA_int_end_N2
Motif
Other DBs
NCBI-GeneID:
128336459
NCBI-ProteinID:
XP_053132123
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All DBs
Position
13:7445391..7542908
Genome browser
AA seq
1455 aa
AA seq
DB search
MAVYIDHQIEALESRGPHSHIAWHHLQPFLAVASHSDSGGSVDIFLEQGEHVSEAHLERN
FRATCLNWHPSKLILAVGCEMGDVVVVNKQDKEHHAVPSNHNADITVLNWSTNGTRLVSG
DKLGVLVLWRMDQRGRVQGPPLLKHEYGKHLSHCIFRPPPPGEDLIQLAKAAVSGDEKAL
DMFNWRKSGMGVPLKMGPQEGLSFFVSVTDGTVHYVNERGKTNHALTAESSVQKLLFMEK
DVLIVLTETLLLSLYKISLEAEVEEIMKVKLSGQIGHPADIILIDRSLLVTAIGEPVLRF
WDLERGENYVLSLDTQFGFQAGECVNCVSYCNAKGLLSAGTDQGRVAMWRKVLLSSQSSL
EGKDRWKLQAPTELKGNIVQIKWGSKKNLLAVNTTSSVVILSEQAMSSHFHQQVAVVQVS
PNLFNIASFSARTTDNLRIDMHVNGVFASKDAVAFWNGKQVAVFELSGASLRNSGSFPCD
SPVLAMHEENIYTIEPNRVQVRTWQGTVKQLLVFSEAEGNPCLLDVCGHFLTVGTDMAHF
KIFDLSRREAKMHCSTKALADLVPGSSGIASVKCNAGGNKVSILINKADGSLDSKICFYD
TEMDLVTLFDFQSGQQKEGREVLSFAGQEADRRNVTEHPELCNRIPVSHFWDQSEPRLFV
CETILDPSQQSSDKKQQLTENVMDVLIVSFFSTEEHGLLLQDSFPLPSAYQTLLGMEVPH
YYFAKKPEAERKEEAEPGLVPLYQMIARMPMRDFIGLEECDKATRDAMLNFSFYLTIGDM
DEAFKSIKLIKSEAVWENMARMCVKTQRLDVARVCLGNMGHARGARALREAEQEPELEAR
VAMLAVQLGMLEDAEQLYKQCKRYDLLNKFYQASDQWQKAIEVAEAHDRVHLRTTYYNYA
KHLEATAEHYLALNYYEKSDTHRFEVPRMLSEDLQALESYVNKMKDKNLWKWWAQYLESQ
ADMEAALKYYEMAQDYFSLVRVYCFQGNIQKAAEIANETGNWAASYHLARQYESQDDIKQ
AVHFYTRAQAFNNAIRLCKENDLNDQLMNLALLSSPEDMIEAARYYEEKREQMDRAVMLY
HKAGHLSKALELAFATQQFAALQLIAEDLDEKSDPALLARCSDFFIEHAQYEKAVELLLA
AKKYHDALQLCLTQNLTITEEMAEKMTISKDSKELSEDSRRELLEQTADCCMRQGNYHMA
TKKYTQAGNKLKAMRALLKSGDTEKIVFFAGVSKQREIYIMAANYLQSLDWRKDPEIMKN
IISFYTKGRALDLLAGFYDACAQVEVDEYQNYEKALGALTEAYKCLSKAKSRSPVDQESK
LTLLQNKMALVKRFIQARRLYPEDPKEAARQCELLLGESDLDSAIRLGDVLGFLVQHHLQ
VQEFQMAYRYLEEMRKKIPCVNLNYYVSQQSVEAVHRGLGIPLSRNPAPERVRHNSMEDK
EVEDEVVDESVALLS
NT seq
4368 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgtatattgatcatcaaatagaagctctcgagtcccgtgggccccattcccac
atagcctggcaccatcttcaaccatttttggctgttgcctctcattccgactctggtggc
agtgtggatatttttctggaacagggagaacatgtgtctgaggcacatctggaaaggaat
ttccgggccacatgcctcaattggcacccgtccaagctgatattggccgtgggctgcgag
atgggggacgtggtggtggtgaacaagcaagacaaggagcatcatgccgttccctccaac
cacaatgccgacattacagtcctgaattggagtaccaatggcacccgtctggtttctggg
gacaaacttggtgtccttgtgttatggaggatggaccagcgggggcgagttcaaggcccc
cctctgcttaaacatgagtacggaaagcatctcagtcactgcatttttcggccacctcct
cctggcgaagacttgatccagcttgcaaaagctgccgtgagtggtgatgagaaggccctg
gacatgtttaactggaggaaatctgggatgggagtgcctctgaagatgggaccccaggaa
ggactctctttctttgtcagtgtgacagatggaactgtgcattacgtgaatgagagaggg
aaaacgaaccatgcgttgacagccgagagttcagtccagaagttgctgtttatggagaag
gatgttctgatcgtcctcacagagactctcctcttatcactttacaaaatatcccttgag
gcagaagtagaggagatcatgaaggtgaagctgagtgggcagataggccaccctgccgac
atcattttgattgaccgaagtctccttgttactgcaataggtgaaccagttcttaggttc
tgggacttggagcgaggcgagaactatgtgctctctttagatacacagtttgggtttcaa
gcaggggagtgtgtgaactgcgtctcttactgcaatgcgaaaggtctcctttcggctggt
acggaccaagggagagtggccatgtggaggaaagtgttactctctagccagagctctctg
gaaggcaaggacagatggaaactgcaggcgcctacagaacttaaggggaatattgtccag
ataaagtggggctccaagaagaatctgttggctgtcaacacaaccagctccgtggtgatc
ctcagcgaacaggccatgtcttcgcactttcaccagcaagtggctgtggtgcaagtgtcg
ccaaacctgttcaacattgcctccttcagcgcgagaacaacggacaacctccgcattgac
atgcatgtgaatggcgtttttgccagcaaggatgctgttgcattctggaatggaaagcaa
gttgccgtctttgaactctcaggagcaagtttgcgcaattcaggttcttttccctgtgat
tctccagtcctggctatgcatgaagaaaacatttacacaattgagccgaatcgtgttcaa
gttcgcacctggcagggcacagtgaagcagctgctggtgttctccgaagcggaagggaat
ccctgcctcctggatgtctgtgggcatttcctgaccgtgggaaccgacatggctcacttt
aagatttttgatctttctcgcagagaagcaaaaatgcactgcagcacaaaggccctggct
gatctagtgccaggcagtagtgggattgcgtctgtgaagtgcaacgctggaggcaacaaa
gttagcatccttatcaacaaggctgatgggagccttgactccaagatctgtttctatgac
actgaaatggacttggtcaccctgtttgatttccagtctggccaacagaaggaagggagg
gaggtgctctcctttgctggacaggaggctgacaggagaaatgtcactgaacatccagaa
ctgtgtaaccgtatccctgttagtcacttttgggatcaaagcgaaccaagactttttgta
tgtgaaactattcttgacccaagtcagcagtcatctgataagaagcagcaactgacggaa
aatgtgatggatgttttgattgtatcgtttttcagtaccgaagaacatggcctcttgctc
caggacagctttccattgccgtcagcttaccagactcttctgggcatggaggtgccgcat
tattactttgccaaaaagcccgaagcagagagaaaagaggaggcagagcctggtctcgta
ccgctctatcagatgatagccaggatgccgatgcgagatttcatcgggctggaagaatgt
gataaagccacacgggacgcgatgctcaacttcagtttctatctcaccattggggatatg
gatgaggccttcaagtccattaagctcatcaaaagtgaagctgtctgggaaaacatggcc
cgcatgtgcgtgaagactcaaaggctggacgtggccagggtttgcctggggaacatgggc
catgcccgaggagccagggcgctgcgggaggccgagcaggagcccgagctggaagccagg
gtggccatgttggcagtccagctgggcatgttggaagatgcagaacagctgtacaagcag
tgcaagcgctacgacctcttgaacaagttctaccaggcctcggaccagtggcagaaagcc
atcgaggtggccgaggctcatgaccgggtccacttacgcaccacctactacaattacgcc
aagcacttggaagcgaccgccgagcactacctcgccctcaactactacgagaagtctgac
acacacagatttgaggtccctcggatgctttcagaagacctccaggccttggagtcttac
gtcaacaagatgaaggataagaacttgtggaagtggtgggcccagtacctggagagccaa
gcagatatggaagcagctttaaaatattacgaaatggcacaagattacttctccctggtc
cgtgtttactgtttccaaggtaacatccagaaggccgcagaaatagcaaacgaaacgggg
aactgggccgcatcgtatcatctggcccgtcagtacgagagccaggatgacatcaagcag
gctgtgcacttctacaccagggcccaggcattcaacaacgcaatccgcttgtgcaaggag
aacgatctgaatgaccagctgatgaacctggctcttctcagctccccagaggatatgatt
gaagccgcccgctattatgaagagaagcgggaacaaatggacagagcagtgatgctctac
cacaaggcagggcacttgtccaaggccctggagttggcctttgccacacagcagtttgct
gccttgcagctcattgctgaggatctggacgagaagtcagacccagccctgctggcacgg
tgctccgacttcttcattgagcacgcccagtacgagaaggccgtggaactcctgctggct
gccaaaaagtaccatgatgccctgcagctctgcctgacccagaacctgaccatcacggag
gagatggccgagaaaatgaccatttccaaggactccaaggagctctcggaggactcccgg
cgggaactcttggaacagaccgccgactgctgtatgcggcagggcaattaccacatggcc
accaagaagtacacacaggcaggcaacaagctgaaggccatgagagccctgttgaagtca
ggagacaccgagaagattgtgttctttgctggagtctccaagcagagggagatctatatc
atggctgccaactatctccagtcgctggactggcgcaaggacccagagattatgaagaac
atcatcagcttctacaccaaaggcagagctcttgacctcctcgctggcttctatgatgct
tgcgctcaggtggaggtggatgagtaccagaactatgagaaggccctgggcgccctgaca
gaggcctacaagtgcctgtcgaaggcaaagagcaggagccccgttgaccaagagagcaag
ctgacactcttgcagaataagatggccctggtgaagaggtttattcaggcacgcaggctc
tacccagaggatcccaaggaggcagccaggcagtgtgaactgctcctgggcgaatcggac
ctcgacagcgccatccgcctgggggacgtcctgggcttcctggtgcagcatcacttgcag
gtgcaggaattccagatggcctaccggtacctggaggagatgcggaagaagatcccctgc
gtgaacctcaactattacgtcagccaacagagtgtggaggcagttcacagaggactaggc
atccctctgagccgaaacccggcccccgagagggttcgccacaacagcatggaggacaag
gaggtggaagacgaagtggtggatgaatccgtggcactgctctcctag
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integrated database retrieval system
