Halomonas cupida: MRB56_18560
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Entry
MRB56_18560 CDS
T11149
Name
(GenBank) sarcosine oxidase subunit alpha family protein
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
hck Halomonas cupida
Pathway
hck00260
Glycine, serine and threonine metabolism
hck01100
Metabolic pathways
Module
hck_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
hck00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
MRB56_18560
Enzymes [BR:
hck01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
MRB56_18560
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
MRB56_18560
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
FAD_oxidored
Pyr_redox_3
FAD_binding_2
HI0933_like
DAO
NAD_binding_8
GIDA
Thi4
FAD_binding_3
Pyr_redox
AlaDh_PNT_C
Lycopene_cycl
3HCDH_N
UDPG_MGDP_dh_N
Motif
Other DBs
NCBI-ProteinID:
XNS33445
LinkDB
All DBs
Position
complement(4106688..4109726)
Genome browser
AA seq
1012 aa
AA seq
DB search
MRQSNRLKQGGRIERSRRLTFTFNGNSYEGYAGDTLASALLANGVDIVNRSFKYSRPRGI
VAAGAEEPNAVVQLGSSEPSQVPNVRATQQALYEGLSARSTNGWPNVQRDLMGLIGKLGG
KMMPPGFYYKTFMAPASMWLTYERYIRKSAGLGRSPGESDPDIYDHLNRHCDVLVIGAGP
AGLTSALVAARSGARVIVCDEQEEMGGSLLASHQALDERPAADWLSDVLAEMEANANVTL
LARTTANGYHDHNFVTLHERRTEHLADTAPMVNGRRQARSRLHRVRAGRVIMATGAHERP
LVYAGNDIPGNFLAGAISTYIRRYAVVPGNKLVLSTANDDGYRAALDWLDAGREVVAVAD
ARQAPDGALVEAVRSRGVRIIDGAAVIEAHGENRVSSVRVAPIDAAAFRISGEIETLKCD
TVASSGGFSPVIHLASHTGSRPSWNDDIIGFIPSLPKGMLAAGSAQGLHELGAVLRDGAA
VGAAAVRDLALDAAEVEVPQVASLHESAAMALFQVPHDKPTLRAPKQFVDLQNDVTAAAI
ELATREGFESIEHVKRYTAMGFGTDQGKLGNINGMAIAARCLGRTIPEVGTTVFRPNYTP
VTFGAIVGRHCRELFDPERYTALHQWHVENGAEFEEVGQWKRPWYFPRTAKGKRETMHEA
VARECLAVREGVGILDASTLGKIDIQGPDAREFLGRVYTNKWAKLPVGRVRYGLMCKDDG
MVMDDGTTSCLAEDHFLMTTSTGGAAAVLEWLELWHQTEWPELDLTMSSVTDHWATMTVT
GPKARDLLAELTDIDLDRDAFRFMDWREGKVAGVPARVFRISFTGELAYEINVQARAAMH
VWKALFAHGEKYDLTPYGTETMHVLRAEKGFIIAGQDTDGSVTPEDLGMQWAVGYDKPFS
WIGKRALTRPDTVRKDRKQLVGLRPKDASVVLEEGAQIVLDPQHAIPMPMVGHVTSSYYS
PTLESGFALAVVKGGHERMGETVYLPMADGKVHEAEIVSTIFVDPKGERQNV
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atgagacagtccaaccgtctgaagcagggcggacgcatcgagcgttcccggcgcctgacc
ttcaccttcaacggcaacagctatgagggctacgccggggataccctggcttcggcgctg
ctggccaatggcgtggatatcgtcaaccgcagcttcaagtactcgcgtccgcgcggcatt
gtcgcggcgggcgccgaagagcccaatgcggtggttcaactgggcagctccgagcccagc
caggtgcccaatgtgcgtgctacgcaacaggcgctctacgaaggactcagcgcacgctcg
accaatggctggccgaatgtccagcgcgatctgatgggtctgatcggcaagctgggcggc
aagatgatgccgccggggttctactacaagacctttatggcgccggcctcgatgtggctg
acctacgaacgttatatccgcaagagcgctggcctcgggcgtagtcccggcgagtcggat
ccggatatctatgatcacctcaaccgtcactgcgatgtgctggtcattggtgccggcccc
gctggcctcaccagtgcactggtggcggcgcgcagtggcgcgcgggtgatcgtctgtgac
gaacaggaagagatggggggctcgttgctggccagccatcaggcgctcgatgagcgtccg
gcagcggactggctgagtgacgtattggccgagatggaggccaatgccaatgtcacgctg
ctggcgcgtaccaccgccaatggctaccacgaccataacttcgtcactctgcacgagcgt
cgcaccgagcatctggccgacacggcgccgatggtcaatggccgtcgtcaagcgcgttcg
cgtctgcatcgcgtgcgggcaggtcgggtgatcatggcgacaggagctcatgagcgtccg
ctggtgtacgccggcaacgatattcccggcaactttctggcgggggccatttccacctat
attcgtcgctatgccgtggtgccgggaaataaactggtgctctccaccgccaatgacgac
ggatatcgtgccgcgctggattggctggatgccggccgtgaagtggtggcggtggccgat
gcccgtcaggcacctgatggcgctctggttgaggccgtgcgcagccgtggtgtacgtatc
attgatggggccgcagtgatcgaggcgcacggtgagaaccgcgtcagttcggtccgggtt
gcaccgatcgatgctgccgccttccgcatcagcggcgagatcgaaaccctcaagtgtgac
actgtcgccagctcgggtggcttcagcccggtcattcacctggcctcgcatacgggctcg
cgacccagctggaacgacgacatcatcggtttcattcccagcctgccgaaaggcatgttg
gccgccggcagcgctcagggtctgcacgagttgggagctgtgttgcgggatggcgccgca
gtaggagcggccgccgttcgcgacctggccctggacgctgcagaggtggaagtgccgcag
gtggcatccctgcacgaaagcgctgccatggcgctgttccaggtgccgcatgacaagccg
accctgcgcgcacccaagcagtttgtcgacctgcagaatgacgtcaccgcagcggccatc
gaactggccactcgggaaggcttcgaatccatcgagcacgtcaagcgctatacggccatg
ggctttggtaccgatcagggcaagctgggcaacatcaatggcatggcgattgccgcccgt
tgcctcggtcgcaccattcccgaagtcgggactaccgtatttcgccccaactacacgccg
gtgaccttcggtgccatcgtcggtcgacactgccgtgagctgttcgacccggagcgttac
accgccttgcatcagtggcacgtggagaatggcgccgagttcgaggaagtagggcagtgg
aagcgtccctggtatttcccacgtaccgccaaaggaaagcgcgagaccatgcatgaggcc
gtggctcgtgagtgtctggctgtgcgcgaaggtgtgggaattctcgacgcctctacgctg
ggcaagatcgatattcaggggccggatgcgcgtgaattcctcggccgtgtgtacaccaac
aagtgggccaaactgccggtcggcagggtgcgctatgggttgatgtgcaaggacgatggc
atggtcatggacgatggcaccaccagttgtctcgccgaggatcacttcctgatgaccacc
tccaccggtggtgcggcggcggtgcttgaatggttggagctgtggcatcaaaccgagtgg
cccgaactggatctgaccatgagttcggtaaccgaccattgggcgaccatgacggtgacc
gggccgaaggctcgcgacctgcttgccgagctgaccgacatcgatctggaccgtgacgct
ttccgcttcatggactggcgtgaaggcaaggtggctggtgtgccggctcgtgtgttccgg
atctcgttcaccggtgaactggcctatgaaatcaatgttcaggcacgcgctgccatgcat
gtctggaaggctctgttcgctcacggcgagaagtacgacctgacaccctacggcaccgag
accatgcacgtgttgcgcgccgagaagggcttcatcatcgccgggcaggacactgatggt
tcggtgacgcctgaagatcttggtatgcagtgggcggtgggctatgacaagccgttctcg
tggatcggcaagcgtgctctgacacgtccggataccgtgcgcaaggatcgcaagcaactg
gtcggcctcaggccgaaggatgccagtgtggtgttggaggagggggcgcagatcgtcctc
gatccgcagcatgcgattccgatgccgatggtgggccatgtgacgtccagttactacagc
ccgaccctggaatccggcttcgcgctggcggtggtcaagggcggccatgagcgcatgggc
gagaccgtctacctgcccatggctgatggcaaggttcatgaagccgagattgtcagcacc
atctttgtcgaccccaagggagagcgccagaatgtctga
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