Halomonas cupida: MRB56_20005
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Entry
MRB56_20005 CDS
T11149
Name
(GenBank) 2Fe-2S iron-sulfur cluster-binding protein
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
hck Halomonas cupida
Pathway
hck00260
Glycine, serine and threonine metabolism
hck01100
Metabolic pathways
Module
hck_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
hck00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
MRB56_20005
Enzymes [BR:
hck01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
MRB56_20005
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
MRB56_20005
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
Pyr_redox_2
FAD_oxidored
NAD_binding_8
HI0933_like
FAD_binding_2
GCV_T_C
GIDA
FAD_binding_3
Pyr_redox_3
DAO
Thi4
AlaDh_PNT_C
Pyr_redox
Motif
Other DBs
NCBI-ProteinID:
XNS33725
LinkDB
All DBs
Position
complement(4445876..4448944)
Genome browser
AA seq
1022 aa
AA seq
DB search
MTQKFRIGNGHSIDVRQPIRFRFDGVEYSAWQGDTLASALLANGVDVVARSFKYHRPRGI
FSAGVEEPNALVEVGEKGRHHPNLRATEVLLHDGLEARGQNAWPSVRWDIGSMAQLVAPL
LGAGFYYKTFMRPAWAWPWYETAIRRAAGLGRAPSHPDGGRHDKRRLFCDVLVVGAGPAG
LMAALAAANGGARVLIADERDTPGGLLLDDSVTLDGMPCHAWVEYMVTRLETMANVRLLR
RTTVHGRYRHHRYQLLQRDEQGTLLIAVNARHTIMATGAIERPLMFPNNDVPGVMLSGAV
RRYLRGYGVVPGLRPVILTNNDSGYACAQALCEAGITPVAILDQREEVPSHSPGPMDGLA
EVSCLAGVRIKAVHGRKRIKRISLESAGVERHIDCDLLCVSGGWTPTLHLLAQGGLDNQR
VVFSDDWGAFVPVESMSLPDLTPAGSCAGVAGLVDILLSGREAGIRAVQGLESKSAVRLP
AIPCPVFACTETSPLVSGVGSNEVGEGASTFVDLQHDVQVKDLELALREGYRSIEHVKRY
TTLGMGTDQGRTSNINGMSIVAQRLSRPVEEVGTTTFRPPFSPVPLGSLAGRESGERLDA
TRYSPMHDWHQQHGAVFMPSSLWVRPQYYRLQEQCLHGRRLQVERQPDRSRLNQHQTAAG
RAGEGTETLHEAACREARNVRERVGIADVSTLGKIELQGPDVAEFLDRIYLNNPGKAPLH
KARYGLMLREDGRVFDDGTVVRIADQRFLISTTTVNAGAVLAHLEFHQQMVWPELKVMIE
PVTEQWAVVALAGPRSREVLARTFPDDDVSNEAFPFLAYRETTFDAGPARLFRISFSGEL
AYEVAVPADNGLALWQRLLEQGADLGIAPYGLEAMDYLRIEKGHLIVGADIDGRVTPMDI
GMGGMLRGENDCVGRRSLALPALSDRSRQRLSGFRSCDGHSAIPAGAQLLLRPWSGEPQR
SLGRITSPGYSVMQEDPIALGLVEPVEKGATLYAVAPLTDQCVQVEVTDTVFHDPKGERL
RA
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgacccagaagtttcgcatcggcaacggacactccattgatgttcggcagccgattcgc
tttcgtttcgacggggtcgagtattcggcttggcagggggataccctggcgtcagcgctg
ttggccaatggcgtggatgtggtggcgcgcagtttcaagtaccaccgcccgaggggcatc
ttcagtgccggcgtcgaggagcccaacgcactggttgaagtgggcgagaagggacggcac
caccccaaccttcgggccacggaggtcctgctgcatgatggtctggaggcgaggggccag
aatgcctggccttcggtacgctgggatatcggcagcatggcacagcttgtggctccattg
ctgggtgcagggttctactacaagaccttcatgcgccctgcctgggcgtggccatggtat
gagactgccattcggcgggctgccgggctgggacgggcaccctcgcatcctgatggtggt
cgccacgacaagcgccgtctgttctgtgatgtattggtggtgggggccggtcctgcaggt
ttgatggccgcgcttgccgctgcgaatggaggtgcgcgtgtgttgatcgccgatgagcgt
gacacaccaggtggcctgctgcttgatgacagcgtgaccctcgatggaatgccctgccat
gcctgggtcgagtacatggtgactcgactcgagaccatggccaatgtgcggctgctgagg
cgaaccaccgttcatggtcgttatcgccatcaccgttatcagcttctccagcgtgatgag
cagggaacgctactgatcgccgtcaatgctcgccataccatcatggcaacgggagccatc
gaacggcctttgatgttcccgaacaacgatgtacctggtgtcatgttgtccggcgccgtg
cgtcgttatctgcggggctatggtgtggtgccggggctgcgtccggtgattctgaccaat
aacgacagtggttatgcctgtgctcaggcactgtgcgaggcgggcattacaccagtggcc
attcttgaccagcgagaagaggtgccgagtcattcacctggtccgatggatgggctggcg
gaagtctcatgcctggccggggtacgcatcaaggcggttcatgggcgcaagcgcatcaag
cggatctcgctggaatcggctggagtggaaagacatatcgattgcgatctgctctgcgtg
tccggtggctggacgccgaccctgcatctgctggcccagggtggactcgacaatcagcgg
gtggtattcagtgatgactggggggcctttgtgcccgtcgaaagcatgtccttgcctgac
ctgactccggcggggtcttgtgctggtgttgccgggctggtggatattcttctcagtggg
cgggaggccggaataagggcggtgcaaggtctggagtcgaagagtgctgtccgacttccg
gcgatcccctgtccggtattcgcctgcaccgagaccagccctctggtcagtggcgtaggc
agcaacgaggtaggcgagggtgcaagcacctttgtcgatctccagcatgatgtccaggtc
aaggacctggaactggctctgcgcgagggatatcgcagcatcgagcacgtcaagcgctat
accaccctgggcatggggaccgaccaggggcggaccagcaacatcaatggcatgagcatc
gtggcgcaacggttgtcgcgcccggtcgaagaggtgggtaccacaaccttcaggccgccg
ttctcaccggtaccgctgggaagtctggcggggcgtgagagtggcgaacgcctggatgcc
acccgctattcgccaatgcatgactggcatcagcagcatggtgcggtgttcatgccttcg
agcctctgggtacgcccccagtactatcgtttacaagagcagtgtctacatgggcggcgc
ctacaagttgagcgtcaacctgatcgaagtcgactgaaccagcatcaaacagcggcaggt
cgtgcgggcgaaggtaccgagacgctgcatgaggctgcgtgccgcgaggctcgaaacgtg
cgcgagcgtgttggcattgccgatgtcagcacgctcggcaagatcgaattgcaggggcct
gatgttgccgagtttcttgatcgaatctacctcaacaatcccggcaaggccccgctgcac
aaagcgcgctacggtctcatgctgcgcgaggatgggcgggttttcgatgatggcaccgtg
gtacgcattgccgatcaacgtttcctgatcagcaccaccaccgtcaatgccggtgcagtg
ctggcgcatctcgagttccaccagcagatggtctggcctgagctgaaggtgatgatcgag
ccggtgaccgagcagtgggccgtcgtcgcgctggccggccctcgcagtcgagaagtgttg
gcacgtaccttccccgatgacgatgtcagcaatgaggcctttccttttcttgcctaccgc
gagacgactttcgatgccgggcccgcgcgtctgtttcgaatcagtttctctggagagctg
gcctatgaagttgccgttccggcggataatggcctggccttgtggcaacgccttctcgag
cagggcgcggaccttggtatcgcgccttatggactggaggcgatggactatctacgcatc
gagaagggccacctgattgtgggtgccgacatcgatggtcgtgtgacgcccatggatatc
ggcatgggtggcatgttgcgtggtgagaatgactgtgtggggaggcgttcactggcactc
cccgcgctgtccgataggtcacgccagaggctgagcggttttcgctcctgcgatgggcac
tcggctattcctgcgggagcgcagttgctgctgcgcccctggagcggagaaccacagcgg
agtctggggaggatcacctcaccggggtatagcgtgatgcaggaggacccgattgcgctg
gggctggtggagcctgtggagaagggagcaacgttgtatgccgttgctccgttgactgat
caatgtgtccaggtcgaagtgaccgacaccgtgttccatgacccgaagggagagcgtctg
cgtgcctga
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