Helicobacter pylori HUP-B14: HPB14_01035
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Entry
HPB14_01035 CDS
T02035
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
hcn
Helicobacter pylori HUP-B14
Brite
KEGG Orthology (KO) [BR:
hcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hcn03016
]
HPB14_01035
03036 Chromosome and associated proteins [BR:
hcn03036
]
HPB14_01035
Transfer RNA biogenesis [BR:
hcn03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
HPB14_01035
Prokaryotic type
HPB14_01035
Chromosome and associated proteins [BR:
hcn03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
HPB14_01035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
SAM_GIDA_C
GIDA_C_1st
Pyr_redox_3
FAD_oxidored
Pyr_redox_2
AlaDh_PNT_C
Pyr_redox
HI0933_like
FAD_binding_2
TTC3
FAD_binding_3
Thi4
Motif
Other DBs
NCBI-ProteinID:
AFI06922
LinkDB
All DBs
Position
complement(210055..211920)
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AA seq
621 aa
AA seq
DB search
MVKESDILVVGGGHAGIEASLIAAKMGARVHLITMLIDTIGLASCNPAIGGLGKGHLTKE
VDVLGGAMGIITDHSGLQYRVLNASKGPAVRGTRAQIDMDTYRIFARNLVLNTPNLSVSQ
EMTESLILENDEVVGVTTNINNTYRAKKVIITTGTFLKGVVHIGEHQNQNGRFGENASNS
LALNLRELGFKVERLKTGTCPRVAGNSIDFEGLEEHFGDANPPYFSYKTKDFNPTQLSCF
ITYTNPITHQIIRDNFHRAPLFSGQIEGIGPRYCPSIEDKINRFSEKERHQLFLEPQTIH
KSEYYINGLSTSLPLDVQEKVIHSIKGLENALITRYGYAIEYDFIQPTELTHALETKKIK
GLYLAGQINGTTGYEEAAAQGLMAGINAVLALKNQAPFILKRNEAYIGVLIDDLVTKGTN
EPYRMFTSRAEYRLLLREDNTLFRLGEHAYNLGLMEQDFYEELKKDQQAIQENLKRLKEC
VLTPSKEVLKRLSELDENPINDKVDGVSLLARDSFNAEKMRSFFSFLAPLNDRVLEQIKI
ECKYNIYIEKQHENIAKMDSMLKVSIPKHFVFKGIPGLSLEAVEKLEKFRPKSLFEASEI
SGITPANLDVLHLYIHLRKNS
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
gtggtaaaagaaagtgatattttagtggttggtggagggcatgcgggcattgaagcgagc
ttgattgcggctaaaatgggggctagagtgcatttaatcaccatgctcatagacacgatc
ggtttagcgagctgtaatccggccattgggggcttgggtaaagggcatttgactaaagaa
gtggatgttttagggggggctatggggattattacggatcatagcggtttgcaatatcgt
gtgttaaacgcttctaaagggccggcggttagggggactagagcgcaaattgatatggat
acttaccgcatttttgcaagaaatctcgttttaaacacccctaatttgagcgtctctcaa
gaaatgaccgaaagtttaatccttgaaaacgatgaggtagtgggcgtaaccacgaacatt
aataacacttatagagctaaaaaagtgatcatcaccacaggcacttttttaaaaggggtg
gtgcatattggcgaacaccaaaaccaaaacgggcgctttggggaaaacgcttccaattct
ttagccttgaatttaagggagcttggctttaaggtggagaggttaaaaaccggcacttgc
ccaagagtggcgggcaatagcattgattttgaaggcttagaggagcattttggggatgca
aaccctccctattttagctataaaaccaaagattttaaccccacccaactctcttgcttc
atcacttacactaaccctatcacccaccaaatcattagggataatttccaccgagccccc
ctatttagcggtcaaattgaaggcataggcccaaggtattgccctagcattgaagataaa
atcaaccgcttcagtgaaaaagaacgccaccagctgtttttagagcctcaaaccattcat
aaaagcgaatattatatcaacggcttaagcacctctttgcccctagatgtgcaagaaaag
gtcattcactctatcaagggcttagaaaacgccctcatcacgcgctatggctatgcgata
gaatatgattttatccagcccacagaattgacccacgctttagaaaccaaaaaaatcaaa
gggctttatttggccgggcaaatcaatgggactaccggctatgaagaagcggcggctcaa
gggcttatggctgggattaatgcggtattagccttaaagaatcaagccccctttatttta
aagcgcaatgaagcttatatcggcgttttgattgatgatttggttactaaaggcacgaat
gagccttacagaatgtttactagccgggccgaataccgcttgcttttaagagaagacaac
acgctttttagattaggcgaacatgcctataatttagggcttatggaacaggatttttat
gaggaattgaaaaaagaccaacaagcaatacaagaaaacttgaaacgccttaaagaatgc
gtgcttacccctagtaaagaggtgttaaaacgcttgagtgaattagacgaaaaccccatc
aatgacaaggttgatggcgttagtttgttggcacgcgatagttttaatgcagaaaaaatg
cgctccttttttagctttttagcccctttgaatgatcgggttttagagcagattaaaatt
gaatgtaagtataatatttatattgaaaagcaacacgaaaatatcgctaaaatggatagc
atgctcaaagtgtctatccctaaacattttgtgtttaaaggcattccaggccttagctta
gaagcggtagaaaaattagaaaaattccgccccaaaagcctttttgaagcttcagaaatc
agcgggatcaccccggcgaatttagacgttttgcatttgtatatccatttgcggaaaaac
tcttaa
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