Helicobacter pylori HUP-B14: HPB14_06445
Help
Entry
HPB14_06445 CDS
T02035
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
hcn
Helicobacter pylori HUP-B14
Pathway
hcn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hcn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HPB14_06445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hcn03400
]
HPB14_06445
Enzymes [BR:
hcn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HPB14_06445
DNA repair and recombination proteins [BR:
hcn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HPB14_06445
Prokaryotic type
HPB14_06445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AFI07965
LinkDB
All DBs
Position
complement(1329277..1329978)
Genome browser
AA seq
233 aa
AA seq
DB search
MKLFDYAPLSLAWREFLQSEFKKPYFLEIEKRYLEALKSPKTIFPKSSNLFYALNLTPPC
AVKIILLGQDPYHSTYLENERELPVAMGLSFSVEKNAPIPPSLKNIFKELHANLGVPVPC
CGDLSAWAKRGMLLLNAILSVEKNKAASHKYIGWEAFSDQILMRLFETNAPLIVVLLGKV
AQKKIALIPPNKHIIITAPHPSPLSRGFLGSGVFTSVQKAYREVYHKDFDFSL
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgaagctttttgactacgctcctttgagtttggcttggcgggagtttttgcaaagcgaa
tttaaaaagccttattttttagaaatagaaaaacgctacctagaagccctaaaaagccct
aaaaccattttccctaaaagctctaatctgttttatgcactcaatctaacgcccccttgt
gcggttaaaatcatccttttagggcaagacccctaccattccacctacctagaaaatgag
cgagaattgccggtggcgatgggcttaagctttagcgtggaaaaaaacgcccccatcccc
ccaagcttaaaaaatatttttaaagaattgcatgcgaatttaggcgtgcctgtgccttgt
tgtggggatttgagcgcgtgggctaaaaggggtatgctgttattgaacgccattttaagc
gtggaaaaaaataaggccgcttcgcacaaatatattggctgggaagcttttagcgatcaa
atattgatgcgcctttttgaaacgaacgcccctttaatcgtggtgttactagggaaagtc
gcccaaaaaaagatcgcactaattccccctaataagcatatcatcatcacagcccctcac
cctagcccactatctagggggtttttagggagtggggtttttacaagcgttcaaaaagct
taccgagaggtttatcataaggattttgatttcagtttgtga
DBGET
integrated database retrieval system
