Halomonas chromatireducens: LOKO_03283
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Entry
LOKO_03283 CDS
T04292
Symbol
ffh
Name
(GenBank) Signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
hco
Halomonas chromatireducens
Pathway
hco02024
Quorum sensing
hco03060
Protein export
hco03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
hco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
LOKO_03283 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
LOKO_03283 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LOKO_03283 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
hco02044
]
LOKO_03283 (ffh)
Enzymes [BR:
hco01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
LOKO_03283 (ffh)
Secretion system [BR:
hco02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
LOKO_03283 (ffh)
Eukaryotic Sec-SRP protein
LOKO_03283 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_22
cobW
ArsA_ATPase
AAA_16
NAT10_TcmA_helicase
AAA_33
YqeC
AAA_30
nSTAND3
KTI12
AAA_31
AAA_14
nSTAND_NTPase5
KAP_NTPase
APS_kinase
ResIII
6PF2K
NACHT
Thymidylate_kin
TctA
ParA
DO-GTPase1
AAA_28
TsaE
SLFN-g3_helicase
DnaB_C
Motif
Other DBs
NCBI-ProteinID:
AMD02329
UniProt:
A0A125R0M7
LinkDB
All DBs
Position
complement(3498966..3500393)
Genome browser
AA seq
475 aa
AA seq
DB search
MFQNLSERLSQTLKSIKGQARLTEDNIKDTLREVRRALLEADVALPVVKDFIDRVRERAV
GQEVSKSLSPGQQFVKIVQQELEATMGEANEGLSLKGAPAVVLMAGLQGAGKTTSVAKLA
RYLREREKKKVLVVSADVYRPAAIDQLETLAAEVSVDFFPSRSDQKPVAIAEAALKHAKI
QFHDVVIVDTAGRLAIDEAMMAEIAELHRVCQPQETLFVVDAMTGQDAANTAKAFHEALP
LTGVILTKADGDARGGAALSVRHITGKPIKFMGVGEKVDALEPFHPDRVASRILGMGDVL
SLIEEAERTVDKDKAERLAKKVKKGDGFDLEDFRDQLQQLKKMGGMGGLLGKLPGMGQMA
EMAQGPGPEKELGKLEALINSMTPKERQRPEIINGSRKRRIAAGAGLQVPDLNRLLKQHK
QMQKMMKKAGKKGGMQKMMRGMSGMMGGGGPGGPGGMGGMGGPGGMGGPGGFPRR
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgtttcagaatctcagcgagcggctttcgcagacgctcaagtccatcaagggtcaggcg
cgcctgaccgaggacaatatcaaggataccctgcgcgaggtgcgccgggccctgctcgag
gccgacgtcgccctgccggtggtcaaggacttcatcgaccgcgtgcgcgagcgtgccgta
gggcaggaagtgtcgaagagcctctccccggggcagcagttcgtcaagatcgtccagcag
gagctggaagcgaccatgggcgaggcgaacgaggggctctcgctcaagggggcgcctgcc
gttgtcctgatggccggcctgcagggcgcaggcaagaccacctcggtggccaagctggcg
cgctacctgcgtgagcgcgagaagaaaaaggtgctggtggtctccgccgacgtctaccgc
ccggcggccatcgaccagctcgagacgctggccgccgaggtgtcggtcgacttctttccc
tcccgctccgaccagaagccggtggccattgccgaagccgcgctcaagcacgccaagatc
cagttccatgacgtagtgatcgtcgataccgccggccggttggccatcgacgaggcgatg
atggccgagatcgccgagctgcaccgggtctgccagccgcaggaaaccctgttcgtggtc
gatgccatgacgggccaggatgcggccaataccgcgaaggcgttccacgaggcactgccg
ctgaccggggttatcctgaccaaggccgacggcgacgcccgaggcggcgccgcgctgtcg
gtgcgtcacatcaccggcaagccgatcaagttcatgggcgtgggggagaaggtcgacgcc
ctggagcccttccacccggatcgggtggcctcgcgcatcctcggcatgggcgacgtgctg
tcgctgatcgaggaggccgagcgcaccgtcgacaaggacaaggccgagcggctggcgaag
aaggtcaagaagggggatggcttcgacctcgaggacttccgcgaccagctccagcagctc
aagaagatgggcggcatgggcgggctgctcggtaagctgcccggcatgggccagatggcc
gagatggcccagggccccggacctgagaaggagctgggcaagctggaggccctgatcaac
tccatgacacccaaggagcgtcagcgccccgagatcatcaacggttcgcgcaagcggcgc
atcgccgccggtgccggcctgcaggtgcccgatctcaaccgactgctaaagcagcacaag
cagatgcagaagatgatgaagaaggcaggcaagaagggcggcatgcagaagatgatgcgc
ggcatgtcgggcatgatgggcggcggtggtcccggcggcccggggggtatgggcggcatg
ggtggccccggtggcatgggcggcccgggcgggttcccccgtcgctga
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