Hippocampus comes (tiger tail seahorse): 109514752
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Entry
109514752 CDS
T04969
Name
(RefSeq) sodium channel protein type 2 subunit alpha-like isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hcq04040
]
109514752
Ion channels [BR:
hcq04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
109514752
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
ATP-synt_B
GPHH
Spem1
Motif
Other DBs
NCBI-GeneID:
109514752
NCBI-ProteinID:
XP_019723671
LinkDB
All DBs
Position
Unknown
AA seq
2018 aa
AA seq
DB search
MAQLLVPPGPDSFRPFVPESLAAIERCIAEEEARRPRGDRRSDCDDENGPKPNSDLEAGK
SLPFIYGDIPPGLVSTPLEDLDSYYSNQKTFIVLNRGKAIFRFNATHALYILSPFNPLRR
IAIRVLVHSMFSMLIMFTILTNCAFMTLSNPPEWAKNVEYTFTGIYTFESLIKILARGFC
MGKFTFLRDPWNWLDFSVILMAYITEFINLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRQKCVRLPNIGNDTNSSSSTLAADMF
LFNSSLAEVNDTFLNSTESSFNWTKYISDSDNYYYLPGSRDALLCGNGTGAGLCPEGFVC
IKAGLNPNYGYTSFDTFSWAFLSLFRLMTQDYWENLYQQTLRAAGKPYMVFFVLVIFLGS
FYLVNLILAVVAMAYDEQNQATIEEAQQKEEEFQAMLEQLKRQQEEAQVAAAAATESGEY
SGRGGPTSESSSVTSKLSSKSAKERRNRWKKRKQKEEEEEERGACNKFHKSVTVDSINRS
FHFSMDVNRLSYEKRCSSPNQSLLSVRGSLLSPRRNSQASLFSFRGRVRDMGSENDFADD
EHSTFEESDSRRGSLFLPRRLERRCSAISQTSLRVPRVMLPANGKMHCAVDCNGVVSLVG
GTSVPNSPVGLLLPEGTTTDTEVRKQRAVDYLDGPGGRQRAMSVASILTNTMEELEESRQ
KFPPCWYRFANTCLIWDCCPAWLKIKEFVNMVVMDPFVDLTITICIVLNTLFMAMEHYPM
TKEFNNVLSVGNQVFTGIFTAEMCLKVIALDPYYYFQEGWNIFDGIIVSLSLMELGLANV
EGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLF
GKSYKEFVCNINEDCQLPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGPTMCLIVF
MMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDSEMNNLQIAVGRIQRGIAFLKSAVRQ
FLQSLIFGGDGKGSSLHEESKPLEELHSNGKGNCITNHTTVEMSKDPGGVYITAEGNGRP
GGGLVVGGMVDADSTEKYPIDDCHYMSFIHNPSLTVTVPIAVGESDFENLNTEDLTSDSS
DVEESKEKLDIEPKHLSSSEGSTVDIRPPGDGVDSVEMEPEESMDPEACFTEGCVSRFQC
CQVNEEAAGFKSWWTLRKTCFVIVEHNWFESFIIFMILLSSGALAFEDIYIEQRRTIKTM
LEYADKVFTYVFILEMLLKWVAYGFVKYFTNAWCWLDFLIVDVSLVSLVANALGYSELSA
IKSLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAG
KYYYCVNTTTDKVFPIEEVNNKSECLNLVNDSARWKNVKINFDNVGAGYLALLQVATFKG
WMDIMYAAVDSRNLEDQPKYEVNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKF
GGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPANAFQGCVFDCITKQAFDIVIMILICL
NMVTMMVETDDQTPDMDDILYWINLVFIVLFTGECVLKMISLRHYYFTIGWNIFDFVVVI
LSIVGMFLSEVIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNI
GLLLFLVMFIYAIFGMSNFAYVKRESGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPI
LNKREPDCDSQMEHPGNYYKGNCGNPSVGIFFFVSYIIICFLIVVNMYIAVILENFSVAT
EESAEPLSEDDFEMFYEVWERFDPDATQFVEYSKLSDFADALDPPLRMPKPNMIQLISMD
LPMVSGERIHCLDILFAFTKRVLGEGGEMDVLRGQMEERFMASNPSKVSYEPITTTLRRK
QEDMSSVIIQRAFRRYMICTAVKKASALYKEQLKEGLRDPDKDVMVIGKFNENSTSDKTD
MTPSTASPPSYNSVTKSDKDKYEKENCEKKKDSQERKK
NT seq
6057 nt
NT seq
+upstream
nt +downstream
nt
atggcccagttgctggtaccgcctggccctgacagctttcgcccctttgtcccggagtct
ctggccgccattgaaaggtgcatcgccgaggaagaggctcggagaccgcggggagatcgt
cgcagcgactgcgacgatgaaaacgggcccaagcccaacagtgacttggaggctggaaaa
tcactccctttcatctatggtgacattcctcccggtttggtgtccactcctctggaggat
ttggacagctattacagcaatcagaagaccttcatagtactgaatcgtgggaaggcaatc
ttccgtttcaacgccactcatgccttgtatattttaagtcccttcaacccgcttcggagg
atagctattagagttttagtccactcgatgttcagcatgttgatcatgttcaccatccta
accaactgtgctttcatgaccctaagtaaccctccggaatgggccaagaatgtagaatac
acattcacagggatttacacttttgagtccctcataaagatcctggccagaggcttctgc
atggggaagttcacttttctgcgcgacccttggaactggctagactttagtgtgatccta
atggcgtatataacagagtttataaacctaggcaatgtttcagctctgcgcacattcaga
gtattgagagctttgaaaactatctcagtgataccaggcttgaagacaatcgtcggcgca
ttgatccagtcagttaaaaagctgtcggacgttatgatcctgacggtgttctgcctcagc
gtctttgctctcattggcctgcagctcttcatgggcaatctgaggcagaagtgcgtgcgc
ttgcccaacattggcaacgacaccaacagcagcagcagcactttggccgccgacatgttt
cttttcaatagcagcctcgcagaggtcaacgacactttcctgaacagcacagagagcagc
ttcaactggaccaagtacatcagcgatagcgacaattactattacctccccgggagcagg
gatgctctgctttgtggaaatggcaccggggctgggctttgcccagaaggcttcgtttgc
atcaaagcgggcctgaatccaaactacggatacacaagttttgacactttcagttgggct
ttcctgtcactattccgattgatgacccaggactactgggaaaacctctatcagcagact
ttgcgtgcggcagggaagccctacatggtcttcttcgttttggtgatcttcctgggttcc
ttctaccttgtcaatctgatcttggctgttgtggccatggcttatgatgagcagaatcag
gccaccatagaagaggctcaacaaaaagaggaggagttccaagccatgctggagcagctg
aaacggcagcaggaggaagcacaggttgccgcggcagcagccacggagagcggcgagtac
agcggcagggggggccccacctccgagtcgtcctctgtgacatccaagctcagttcgaaa
agtgcaaaagagcgacgcaacaggtggaagaaaaggaaacagaaggaggaagaggaggag
gagaggggcgcatgcaacaagttccataaatctgtaactgtggacagcatcaacagatcc
ttccacttctccatggatgtgaaccgactttcctatgagaagaggtgctcctcgcccaat
cagtctctcctcagcgtacgcggatcactcctctcaccacggaggaacagccaagctagt
ctcttcagcttccgcggacgagtacgcgacatgggctcagaaaacgactttgcggacgac
gagcacagcaccttcgaagagagcgacagccgccggggctccctgttcttgccacgtcgc
ctggagcgtcgctgcagcgccatcagccagacgagcctcagggtgcctcgtgtgatgctt
cctgccaatggcaagatgcattgcgcggtggactgcaatggtgttgtttcgctggtcgga
ggaacctctgtacctaactctcctgttggtctcctgctgcctgagggtaccacaacagac
actgaagtgagaaagcaacgcgctgtggattatttagatggaccaggaggcaggcaaaga
gccatgagtgtggccagtatcctcaccaacacgatggaagagcttgaagagtcgaggcaa
aaatttcccccttgctggtatcgatttgccaacacttgtttgatctgggattgttgcccc
gcctggctcaaaattaaggagtttgtcaacatggtggtcatggacccgtttgttgatctg
acgatcacaatttgcatcgtcctcaacaccctttttatggccatggagcattacccgatg
acgaaagaattcaacaacgtcctttcggttggaaaccaggtgttcactggcattttcacg
gcagagatgtgcctcaaggtcatcgctctggacccttactattacttccaggaaggctgg
aacatttttgacggcattattgtaagtctgagtctgatggagctcggtttggccaacgta
gagggcctgtctgtgctcaggtccttccgactgctgagggtcttcaaactggctaaatcc
tggccaactctgaacatgctaatcaagatcatcggcaactcagtgggggctctgggaaac
ttgaccctggtgctcgccatcatcgtcttcatctttgctgtggtgggcatgcaacttttt
ggcaagagctacaaggagtttgtgtgtaacataaatgaggattgtcagctaccgcgctgg
cacatgcacgatttcttccactccttcctcatcgtgttccgggtgctttgtggagagtgg
atcgagaccatgtgggactgtatggaggtagcaggaccaacaatgtgtctaattgtcttc
atgatggtgatggtcatcggaaacttggtggttctgaacctgtttttggctctgctcctg
agctcattcagcgccgacaacttggcggcaactgacgacgacagcgagatgaataacttg
caaattgccgtcggccgcatccagcgcggcatcgcctttttaaaatccgctgtccgacag
ttcttgcagagcctgatttttggtggggacgggaagggctccagcctgcatgaagagagc
aaacccctggaagaactacacagcaacggcaaaggcaactgcatcacgaatcacacgaca
gtggaaatgagcaaagaccccggcggggtgtacattacagctgagggcaacgggcgtcca
ggcggaggcctggttgtcgggggcatggtcgacgcggacagcaccgaaaagtaccccata
gacgactgtcactacatgtcgtttattcacaacccgagcctgacggtcacggtgccgatc
gccgtgggcgagtcagactttgagaacctcaacaccgaggacttgaccagcgattcctca
gacgtggaggaaagcaaagagaaactcgacatagagcccaaacatctgagctcttcagaa
gggagcactgttgatattcgccctccaggagatggggtggattcggtggaaatggagcca
gaagagtcgatggacccagaggcctgctttactgagggatgcgtcagcagattccagtgc
tgccaggtcaatgaggaagcagccgggtttaagagttggtggacactcaggaaaacctgt
tttgtcatcgtggagcacaactggtttgaatcctttatcatttttatgatcctgctcagc
agtggtgcgttggcttttgaagacatttatattgaacagaggaggaccatcaaaacgatg
ctggagtacgctgacaaagtctttacgtacgtcttcatcctggagatgctgttgaagtgg
gtggcctatggctttgtcaagtacttcaccaacgcctggtgctggctcgacttcctcatt
gttgacgtgtccctcgtcagcctggtggccaacgctctgggctactccgagctcagcgcc
atcaaatctctgaggacactgcgagccctccggccactgagagccttatctcggttcgag
ggcatgagggttgtggtgaacgcactactgggggccattccctccatcatgaatgtgctg
ctggtctgcctcatcttttggctcatcttcagcatcatgggggtcaacctgttcgcaggg
aagtactactactgcgtcaacaccaccaccgacaaggtcttccccatcgaggaagtcaac
aacaagtccgagtgcctgaatctggtcaacgacagcgcccggtggaagaacgtcaaaatc
aattttgacaacgtcggcgctggttatttggcgttgttgcaagtggcaacatttaagggc
tggatggacattatgtatgcagctgtggattctcgcaacctggaagatcagcccaaatac
gaagtcaacttgtatatgtacctgtactttgtcatcttcatcatctttggttcctttttc
accctcaacctttttatcggcgtaatcattgacaacttcaaccagcagaagaaaaagttt
ggagggcaagatatcttcatgacagaggaacagaagaaatattacaacgctatgaagaag
ttgggctcaaagaaaccacaaaaaccaattcctcggcccgcgaatgcatttcaaggctgt
gtcttcgactgcataacgaagcaggcttttgacattgttatcatgatcctcatctgccta
aacatggtgaccatgatggtggagaccgacgaccagaccccagacatggacgacatcctt
tactggatcaacctggtcttcattgtgctcttcacaggggagtgcgtcctgaagatgatc
tccttgcgtcactattatttcaccataggttggaatatatttgattttgtggtggtgatc
ctgtccattgtaggtatgtttttgtccgaggtgatcgagaaatactttgtgtcgccgacg
ttattccgagtgatccgtctggccaggatcggccgcattctccgccttatcaagggagcc
aagggcattcggacgctcctctttgccctgatgatgtcacttcccgccctctttaatatc
ggtctcctcctcttcttggtcatgttcatctacgcaattttcggcatgtccaactttgcc
tacgtcaaacgggagtccggaatcgatgacatgttcaatttcgagacctttgggaacagt
atgatctgcttgttccagatcactacctcagccgggtgggatggtctgctggcacccatc
ctgaacaagcgggaacccgactgcgacagccaaatggagcacccgggcaactattacaaa
ggcaactgtggcaacccgtcggtgggtattttctttttcgtcagctacatcatcatttgc
ttccttatcgtggtcaacatgtacattgccgtcatcctggagaacttcagcgtggcaacg
gaagagagcgccgagccgctgagcgaggatgactttgagatgttttacgaagtctgggag
cgctttgaccccgacgccacgcagttcgtggagtacagcaaactgtcggactttgccgac
gcgctggacccgccgttgcgcatgcccaagcccaacatgattcagctcatctccatggac
ttgcccatggtcagcggcgagcgcatccactgcctcgacatcctgtttgccttcaccaag
cgagtactcggggaaggcggcgagatggatgtgttgcgcgggcagatggaggagcgcttc
atggcatccaatccttcaaaggtgtcgtacgagcccatcaccaccaccctccgccgcaag
caggaagacatgtcctccgtcatcatccagagagccttccgccgctacatgatttgcacg
gccgtgaagaaggcctcggccctctacaaagagcagctcaaagagggcttacgtgacccc
gacaaggacgtgatggtcatcggcaaattcaatgagaactccacctcggacaaaactgac
atgaccccgtccacggcttcccctccctcttacaacagcgtgacaaaatctgacaaggac
aaatatgagaaagaaaactgtgagaagaaaaaagactcgcaagagcgaaagaaatga
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integrated database retrieval system
