Hippocampus comes (tiger tail seahorse): 109515677
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Entry
109515677 CDS
T04969
Name
(RefSeq) interferon regulatory factor 1-like isoform X1
KO
K09444
interferon regulatory factor 1
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
109515677
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hcq03000
]
109515677
Transcription factors [BR:
hcq03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
109515677
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF
GAPES4
Motif
Other DBs
NCBI-GeneID:
109515677
NCBI-ProteinID:
XP_019725204
UniProt:
A0A3Q2YU87
LinkDB
All DBs
Position
Unknown
AA seq
319 aa
AA seq
DB search
MPVSRMKMRPWLEKMIESKTIVGLAWLDKEKTMFSIPWKHAARHGWNMDKDACLFKEWAI
HTGKYVKGDTCDPKTWKANFRCAMNSLPDIEEVKDKSVNKGQLAMRVFRMLPQKQRVKRD
KAKSRKQVRMTAEDTDYSDSQSPPDSSRLDEDMASPQENVVDSTVCMDSQGERTRNRTDD
PEPWSAGSFSDIPIFGLGNDLSGSFEDRFQVSPERSSEFEYDIVEICQQLERDAQTFKAS
CDIKALLRPCTSPGSQWSESSADDGDEMSLAPHYTTLSSDFNMPADNPWSDLHVPGFSGF
CSGLDNGHSLDFMGLSSLM
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgccggtatccaggatgaagatgcgcccatggctggagaaaatgatcgagtccaaaacc
atcgtcggtttggcctggctggataaggagaagaccatgttctccattccttggaagcac
gcagctcgccacggctggaacatggacaaggacgcgtgcctgttcaaggagtgggccatc
cacacagggaaatacgtgaagggcgacacctgcgaccccaagacctggaaggccaacttt
cgttgcgccatgaactcgttgccggacatcgaggaagtgaaagacaagagcgtcaacaag
ggccagttggccatgcgagtcttccggatgctgccccagaaacagagagtaaaacgggac
aaagcaaagtccagaaagcaggtcaggatgacggcggaggacaccgactacagcgatagc
cagtcaccgcctgactcatctcggctggacgaagacatggcatcccctcaggagaacgtg
gtggacagcaccgtgtgcatggactcgcaaggcgagcggacaaggaatcggacggacgac
ccggagccatggagtgcggggtccttttcggatatcccgatatttgggctgggcaacgac
ttgtccggaagcttcgaagacagattccaagtttcacccgagcgcagctccgagtttgaa
tacgacatagtagagatttgccagcaactggagcgagacgcgcagaccttcaaggccagt
tgtgacatcaaggcgctcctaagaccgtgcaccagtccggggagccagtggagcgagtct
tcagcggacgacggggacgaaatgtcgctggcgcctcattacaccacgctgagctcagac
ttcaacatgccggcggacaacccctggagcgaccttcacgtccccggattcagtggcttt
tgttcgggactggacaatggtcactcattggactttatgggcctctcgtcgttgatgtga
DBGET
integrated database retrieval system
