Hippocampus comes (tiger tail seahorse): 109519971
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Entry
109519971 CDS
T04969
Symbol
ddx3x
Name
(RefSeq) ATP-dependent RNA helicase DDX3X isoform X1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
109519971 (ddx3x)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcq03019
]
109519971 (ddx3x)
03041 Spliceosome [BR:
hcq03041
]
109519971 (ddx3x)
03036 Chromosome and associated proteins [BR:
hcq03036
]
109519971 (ddx3x)
Enzymes [BR:
hcq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109519971 (ddx3x)
Messenger RNA biogenesis [BR:
hcq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
109519971 (ddx3x)
mRNA cycle factors
Common to processing body (P body) and stress granule
109519971 (ddx3x)
Spliceosome [BR:
hcq03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
109519971 (ddx3x)
Chromosome and associated proteins [BR:
hcq03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
109519971 (ddx3x)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
109519971
NCBI-ProteinID:
XP_019732425
UniProt:
A0A3Q2YJN3
LinkDB
All DBs
Position
Unknown
AA seq
716 aa
AA seq
DB search
MSHVVVDNPHGLDQQLAALDLNSVEGQGGGTGRRYIPPHLRNKDGPKNAGNAYSAARQCG
YSVAPVNLYSSGWDGGRSNGFVNGYHDNRTNGGFGGRGPPRHDRGFGGYESKDGNWGGQA
RDNAFNSFGGRNDRSKSAFFNDRGAGSRGRYERGGFSGGGNSRWAEESRDEDWSKPTAPN
ERLEHELFSGSNTGINFEKYDDIPVEATGSNCPPHIESFHDVDMGEIIMGNITLSRYTRP
TPVQKHAIPIIKSKRDLMACAQTGSGKTAAFLLPVLSQIYTDGPGDALQAAKNSGQENGR
YGRRKQYPISLVLAPTRELALQIYDEARKFAYRSRVRPCVVYGGADIGQQIRDLERGCHL
LVATPGRLVDMMERGKIGLDYCNYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGIRQTM
MFSATFPKEIQILARDFLEDYIFLAVGRVGSTSENITQKVVWVEETDKRSFLLDLLNATV
IPNEIQESGTDAPEKPGKDSLTLVFVETKKGADALEDFLYHEGYACTSIHGDRSQRDREE
ALHQFRSGRCPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLAT
SFFNDKNSNITKDLLDILVEAKQEVPSWLESLAYEHQHKSSSRGRSKRFSGGFGARDYRQ
TPGGSGGFGGNRTGRTSGGHGGNRGFGGGGFGGNFYGNDGYGGNYSHSGSVDWWGN
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgtggtcgttgacaatccacacggtctagatcagcagcttgctgccctagac
ttgaactctgttgagggacaaggcggaggaactggcagacgttacattccacctcacttg
aggaacaaagatggtcccaaaaatgcaggaaatgcttattccgctgctagacagtgcggt
tattcagtggcaccagtaaatctctattcctctggatgggatggtggccgcagcaatgga
tttgtgaatggttaccacgacaaccgcacaaatgggggatttggagggcgtggacctcct
cgccatgatagaggatttggtggttacgagagcaaggatggcaattggggtggacaggca
agagacaatgccttcaacagctttggaggacgtaacgacaggtcaaagtctgccttcttt
aatgaccgcggagcaggctcaaggggaaggtacgaacgtggcggcttttctggaggcgga
aacagtcgttgggccgaagaatccagagacgaggattggtccaagcctactgccccaaat
gagcgtctggaacatgagctcttctcaggcagcaatacggggattaactttgagaagtat
gatgatatccccgtagaggccacgggaagcaactgcccacctcatattgaaagtttccat
gacgtggacatgggggagattatcatgggcaacatcaccctgagtcgctacacacgtccc
actccagtccagaagcatgccattcctattatcaagtccaagagagacctcatggcctgt
gcccagactggatccggaaagactgcggctttcctgcttcctgtgctgagccagatctac
acagatgggccaggagacgctctgcaggcagccaagaatagtggacaggagaatggaaga
tacgggcgtcgtaagcagtacccaatctccctcgtccttgctcctaccagagagctggca
cttcagatctatgatgaggccagaaagtttgcctatcgctcacgtgtgcgcccgtgtgtg
gtgtacggtggcgctgacattggccagcaaatcagggacttggagagaggctgtcacttg
ctggttgccactccgggtcgcctggtcgacatgatggagaggggcaagattggtcttgat
tactgcaactacttggtgctggatgaagctgaccgcatgttagacatgggctttgagcca
cagataagacgtattgtggagcaagacaccatgccgccaaaaggcatccgtcagaccatg
atgtttagcgccaccttccccaaggagatccagatcctggcgcgcgatttccttgaggac
tatattttcctggcagtcggccgcgttggttccacctcagaaaacatcacccagaaggtg
gtctgggtcgaggagaccgacaagaggtccttcctcttagaccttcttaatgccacagtt
attccaaatgagattcaggaaagtgggacagatgccccagaaaagccaggcaaagactcg
ctgactcttgtctttgtggagaccaagaaaggtgcagatgctttggaggactttctgtat
catgagggctacgcctgcaccagcatccacggtgatcggtctcagagagaccgcgaggaa
gctctccaccaattccgctcagggcgctgcccaatcttggtggccacagctgtggctgca
agaggtctggacatctccaatgtgaagcatgtcattaacttcgacctgcccagtgacatt
gaagaatacgttcaccgtatcggccgtacgggacgtgtgggcaaccttggtctggccacg
tcgttctttaacgacaaaaacagcaacataaccaaagacttactggacattttggtggag
gcgaagcaggaggtcccgtcctggctggagagcctggcctacgagcaccagcacaagagc
agcagtcgcggtcgctccaagaggttttctggtggttttggcgctcgggactaccgacag
acaccaggaggatctggaggcttcggtggcaaccgcacaggccgaacttctggtggacat
ggagggaaccgtggcttcggtggaggtggctttggaggcaacttttacggcaacgacggc
tacggaggaaactacagccactcgggaagtgtggactggtggggcaactag
DBGET
integrated database retrieval system
