KEGG   Hippocampus comes (tiger tail seahorse): 109521324
Entry
109521324         CDS       T04969                                 
Symbol
exosc4
Name
(RefSeq) exosome complex component RRP41
  KO
K11600  exosome complex component RRP41
Organism
hcq  Hippocampus comes (tiger tail seahorse)
Pathway
hcq03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hcq00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    109521324 (exosc4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hcq03019]
    109521324 (exosc4)
Messenger RNA biogenesis [BR:hcq03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     109521324 (exosc4)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     109521324 (exosc4)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 109521324
NCBI-ProteinID: XP_019734688
UniProt: A0A3Q2YBW5
LinkDB
Position
Unknown
AA seq 257 aa
MSSFRCFVLCGNMAGLELLSDQGYRLDGRKASELRKVQARMGVFAQADGSAYLEQGNTKA
LAVVYGPHEMRGSRSRTLHDRAVINCQYSMATFSMSERKRRPHGDRKSTEMSLHLKQTFE
AAVMTQLYPRSQIDIYVKILQSDGGNYSVCVNAATLAVIDAGIPMLDYVCASTVGFVDET
PLADLCYAEESGGVSSLALALLPRGGQIALLQMDARLHQDNLEALMDAAMTACKGVSKVL
DQVVRQHLQEASLATGD
NT seq 774 nt   +upstreamnt  +downstreamnt
atgtcatcctttcgctgttttgttctgtgtggaaacatggcgggcttggagttgctgtct
gaccaaggctaccgtttggatggacgcaaagcctccgaacttcgcaaggttcaagcccgt
atgggtgtgttcgctcaggccgacggctctgcgtatttagagcagggaaacaccaaagcc
ttagcggtcgtgtacggtccgcacgaaatgcgagggtcccgcagtcgaacccttcacgac
cgggctgtcatcaattgccagtacagcatggccactttcagcatgtcagagaggaagcgg
aggccgcacggtgaccgcaagtccaccgagatgagcctccacctcaagcagacgtttgag
gccgccgtgatgacgcagctctatccgcgctctcagatagacatttacgtcaagatcctc
cagtcagatggaggcaattacagtgtgtgtgtgaatgccgctaccctggctgtgatcgac
gcgggcatccccatgttggactacgtgtgcgcctccaccgtgggctttgtagacgagacg
ccgctggccgacttgtgctatgccgaagagagtggcggtgtgagctccttggcgctagca
ctgctgccccgcggcgggcagattgcgctgctgcaaatggatgccaggctgcatcaggac
aacctggaggccttgatggacgccgccatgacggcttgcaaaggcgtgagcaaagtgctg
gaccaggtggtgcgtcaacacctccaagaggcttcgctggccaccggagactga

DBGET integrated database retrieval system