Hippocampus comes (tiger tail seahorse): 109523669
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Entry
109523669 CDS
T04969
Symbol
cntn1
Name
(RefSeq) contactin-1
KO
K06759
contactin 1
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq04514
Cell adhesion molecule (CAM) interaction
hcq04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
109523669 (cntn1)
04517 IgSF CAM signaling
109523669 (cntn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hcq04515
]
109523669 (cntn1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
hcq00537
]
109523669 (cntn1)
Cell adhesion molecules [BR:
hcq04515
]
Immunoglobulin superfamily
Contactins
109523669 (cntn1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
hcq00537
]
Others
109523669 (cntn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
Fn3_VIN3
PsaS
Motif
Other DBs
NCBI-GeneID:
109523669
NCBI-ProteinID:
XP_019738540
LinkDB
All DBs
Position
Unknown
AA seq
1020 aa
AA seq
DB search
MAPTTLSLLALVSLVPVTLAILFGEPRIFGEEATGYGPIFEEEPVDVVYTEDSPDGRISM
NCRARANPPAAYRWRRDNWEIKLMEQPDEHYSLVGGNLVISNPRQKKHAGTYICVAHNIY
GTVISKEARVKFGFLEEFPQEERDPVTVREGQGAVLLCAPPKAWPEEVSYRWIFNEFPVF
LNMDRRRFVSQRTGNLYISKVEAQDAGNYSCFVSSPVLGKSVFSKFIPLIPLPPDDGEER
KYPADIRVKFPDTTALLASNITLECFALGNPIPHIVWRKVDATDLPANHEISESGAALHL
YNVQYEDVGAYECEAINTKGKDWHKAWLYVECERLPRASWPSPFVIFFFFSPQSGKGELK
FSSLTFADSGMYQCIAENYWGIKYANAELRVIACAPTFEFNPLKKQLLGARDGRVLIECK
PRAAPRPRFTWSKGKELLFNSSRISIMFDGTLEILNATKNDEGFYTCFAENDRGKANSSG
YLTITEATSITVAPEDTEVTVGGEVVLACSASYDPMLDIAFIWAIDFRVIDFDAEWQHYE
RIMSQEGSGNLRIKNAQIWHEGRYTCTAQTVVDGDAAYADLKVVGVPGPPGVIRVEDIGD
TWVKLLWTKGAEHNSPILSYTIQTRHFWSLHEDDWRNASTSPSFLDGTVERADVTDLYPW
MEYQFRIIATNEYGSGEASIPSLKIKTWDAPPVVSPADVEGYGGRNGEIIITWTPVQPWY
FYGKKFGYIVAFKPHDGYDWWYETISDPETRRYVHKDSFFLPGDEDFQVREFQVKIKTFN
VKGDGPYSLTKVIYYPRDVPTEHPTDVYARPVSSTEALVWWLPVVDTGTGLQQYIEGYQV
KYWRKYIDTEPGANRIFVNATVSQTRLENMLPDSHYLIEVRAFNGAGLGPPGEHCEMFTK
RPPPAEPPRMWRFISWTGKWLYVWWDHITYDWFGNVSFPLYYKVMFRKTGYIYGKVYVTG
WHFMDFPMPQFGDYELMVRGRYEGGDGPVRTIKLLGKASMTTPTLSLTSGLLLALCIAAL
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccacgaccttgtcgctgctggccctcgtctccttggtccccgtcacattggca
atcctgtttggggagcccaggatatttggcgaggaagctactggttacgggcccattttc
gaggaggagccagtggatgtggtctacaccgaggactcccccgatggtaggatctcaatg
aactgcagggcccgagccaatcctccagccgcttacaggtggcgccgcgacaactgggag
atcaagctgatggagcagccggatgagcactacagcctggtggggggcaacctggtcatc
agcaaccccaggcaaaagaagcacgccggcacgtacatctgcgtggctcacaacatctac
ggcaccgtcatcagcaaggaggcccgcgtcaagtttggatttctcgaggagtttcctcaa
gaggagagagacccggtcactgtcagagaaggccagggggcggttctgctgtgtgcccct
cccaaagcgtggccagaggaggtgtcttaccgctggatcttcaatgagttccccgtgttc
ctcaacatggaccgccgccgttttgtctcgcagaggaccggcaacctgtacatctccaag
gtggaggctcaggacgccgggaactactcctgcttcgtctccagccccgtcctgggaaaa
agcgtcttttccaagttcattcctctgatcccgttgccaccagacgatggcgaagaaaga
aaataccctgcagacatcagggtgaagttcccagacacaacagccctgctcgcctccaac
attacgctggaatgctttgctctggggaatcccatccctcacattgtatggaggaaagtg
gacgccacagacttgccggccaaccacgagatcagcgaatcgggcgcggcgttgcacctc
tacaacgtgcagtacgaagacgtgggcgcgtacgagtgcgaggccatcaacaccaaaggg
aaggactggcacaaggcctggctctacgtggagtgtgagcgtctcccacgcgcgtcatgg
ccgagcccatttgtaatttttttttttttctccccccagtccggaaaaggtgagctgaag
ttctccagcttgacgtttgccgactccgggatgtaccagtgcattgcagagaactactgg
ggcatcaaatacgccaacgccgagctgcgggtgatcgcatgcgctccgacctttgagttc
aaccctctgaagaagcagctcctcggcgcccgagacggccgcgtattgatcgagtgtaaa
ccccgagcggccccgaggcctcgcttcacctggagcaagggcaaagagctgctcttcaac
agttcacgcatctccatcatgtttgacggcactctggagatcctcaacgccacaaaaaac
gacgaaggtttctacacgtgctttgctgagaatgacagagggaaggccaacagctccggt
tatctcaccatcacggaggcaaccagcatcacggtggctcccgaagacacggaggtgacg
gtaggcggcgaggtggtcctggcctgctcggcctcctacgaccccatgctggatatcgcc
ttcatctgggccatcgacttccgggtcatcgactttgacgccgagtggcaacactacgag
cgcatcatgagccaagaaggcagcgggaacctgcgcatcaagaacgcgcagatctggcac
gagggccgctacacgtgcacggctcagaccgtggtggacggcgacgcggcgtacgcagac
ctaaaagtcgtcggggtcccggggcctcccggtgtcatccgcgtggaggacatcggcgac
acgtgggtgaagctgctgtggacgaaaggagccgagcacaacagtcccattctgtcctac
accattcagaccaggcacttctggtctctgcacgaggacgactggaggaacgccagcacc
tcgccgagcttccttgacggcaccgtggagcgggccgacgtcaccgacctgtacccctgg
atggagtatcagttccggatcatcgccacaaacgagtacggctcgggagaggccagcatt
ccctcgctcaagatcaaaacttgggacgcaccaccggtggtctctcccgccgatgtggaa
ggctacggcggtcggaatggcgagatcatcatcacgtggacgcccgtgcagccgtggtat
ttctacggcaagaagttcggctacattgtggccttcaagccccacgacggttacgactgg
tggtatgagaccatctccgacccggaaaccaggcgctacgttcacaaggactccttcttc
ctgcccggcgacgaggacttccaagtacgggagttccaggtgaagatcaagaccttcaac
gtgaagggagacgggccctacagcctcaccaaagtcatctactaccctcgagacgtcccc
acagagcatccaaccgatgtctacgctcggccagtgtcctccacggaggcgctggtgtgg
tggctcccggtggtggacacgggaacgggcctgcagcagtacattgaaggctatcaggtg
aaatactggcgaaagtacatcgacacggagccgggagccaatcgcatctttgttaacgcg
acggtgagccaaaccaggctggagaacatgctgcccgactcgcattacctcatcgaagtc
cgagcttttaacggagcgggccttggcccgcctggcgaacactgtgagatgttcaccaaa
agaccaccgccagcggagccccccaggatgtggcgcttcatctcgtggactggaaagtgg
ctgtacgtgtggtgggatcacatcacgtacgactggtttgggaacgtctccttcccgctc
tattacaaggtcatgttccgaaagacgggctacatctacgggaaggtctacgtcacaggc
tggcacttcatggatttccccatgccgcagtttggcgactacgagctgatggtccgcggg
cgctacgagggaggcgacggtcccgtcaggaccatcaaactcctgggtaaggcctccatg
accacgcccacgctcagcctcacctctggactcttgctggcgctgtgcattgcggcattg
taa
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