Hippocampus comes (tiger tail seahorse): 109526180
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Entry
109526180 CDS
T04969
Name
(RefSeq) ATP-binding cassette sub-family A member 1-like
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq02010
ABC transporters
hcq04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
109526180
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
109526180
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hcq02000
]
109526180
Transporters [BR:
hcq02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
109526180
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
AAA_23
SRP54
AAA_29
Motif
Other DBs
NCBI-GeneID:
109526180
NCBI-ProteinID:
XP_019742850
LinkDB
All DBs
Position
Unknown
AA seq
1450 aa
AA seq
DB search
MAIPQALYILLWKKITHCKRNKIGLCFELSWPLIIVGFFTLVLPKNRYRSDDTTRSSTPP
RIQVFSPDISNPYSNEVGNVDNSMFWDDNPGADTNSFASVHDMVETAESQILPQHRQEQE
IPNEMRILHPVILPVAMALAWIYPVMRTIRDVVFEKESRMKETMKLMGLSSGTLWLSWFI
TSLVPSLVSIVPLAALLKWGRIVKFTSLGVLIFFLVAFATANIMLCFLMSTFFSKANLAA
VCGGLIYLSLYIPPLLSLTLTTTTKAATIFASFLSPAAFGFACQCFYPSESQGIGIQWNT
IGSSVSEKISLNFGIFIMMFFVDAFMYAAAAWYIEAVFPGQYGLPLPWNFLFDINYWKGI
QVVKSRQIPVAPMEENKDYAQHREEILDFDHVVGSLARKDLIEADPSNLVLGVSINNLVK
IYKKGAVKAVDHLNLKFYEGQITSFLGHNGAGKTTTISVMTGMFPPTSGTVYINGMDVCY
QLNIIRKILGVCPQDNVLFDFLTVGEHLWFYGCLRGKPKDEVRLECDSWLQEVGLLCKRH
ELIKNLSGGMKRKLLVILAFVGGSKVVILDEPTAGVDPFSRRSIWDLLLKYRKGRTIILS
THYMDEAELLSDRIAIISQGKLCCCGSPLFLKFKLGSGYTLTVVKKDSDSSGDRDAPRQG
HSLDIVANSSSMEALLALAQRHFPTASLVMESLREAVINIPQEASMNNRLADFLSELDQN
LGQVGIITYGLSDTKLEDIFLRVVEETEYQLESELHADPPQQSTEQNDEFQEKHLLSGFG
QRGTLTGWSMTCQHLRALFIKRWLYARRNTQSFFAQIVLPAGLLLGFLAISDRKKPPTDQ
VGQLLSAGITIPFILMVAISCVPSCSVLFLIEERASKATHLQFVSGLQPFLYWLTNICWD
MLNYAVTAFLMVLIIIAFKIEGYTSDSILRALILLLLFYGWSVIPMMYPATFVFSDSTTA
YIVFSCVNLFSGIICSAATYFQIMSQVEAPPSWTWHMLFILPHYSLGKGLVDIQIQPQIS
MLIFHTPSPMSREQLRVFLKTANVALTPEFLGVRSSSQMLAQPFLTRRSPVLLLLQGNFA
ILSMKIQGLLLGNPSAFVLQCFGLLGVNGAGKTSTFRMLTGDLSITYGEAFLQNRSVIRE
MDRVHQLMGYCPQFDAIFKLLTGTENLELHARLRGMPEESVTQVALWCLKKVGLSQYAKQ
EAGNYSGGNKRKLSTAIALIGAPLVLFLDEPTSGMDAKAKRFMWDCFRNFTKKGRAVVLT
SHSMEECEALCSRMAIMVNGTFRCLGSVQHLKNRFGEGYTIALRLAESESTPDMCPVNSY
MKNCFPMIDLKECHQTVLTYQLPEHACSLAKIFKVLANHEALGISAFSISQTNMDQVFIN
FAMEQSDAEGPTNMIVNNGTQQTNLTTQPSQMARARIPHESPNPLPQRTTASGRRSKKAR
KASKSQFKVM
NT seq
4353 nt
NT seq
+upstream
nt +downstream
nt
atggctattccccaggcactttatatcctgctgtggaagaaaatcacccactgcaaacgt
aacaagattggactgtgtttcgagctctcctggccactcatcatcgttggcttcttcact
ttggttctgcctaaaaaccgatatagatcagatgataccacaagatcatcaacaccgccc
aggattcaagtatttagccccgacatcagcaatccctattcgaacgaagttggcaacgtt
gacaactctatgttttgggatgacaatccaggagctgacacaaacagctttgcgtctgtt
cacgacatggtggagacggcagaatcccagattttgccacaacataggcaggaacaggag
attcccaacgaaatgcgaatattacacccggtgattttgccagttgccatggcactggcc
tggatctatcctgtgatgaggaccattcgggatgtggttttcgaaaaggaatccaggatg
aaagaaaccatgaaattgatgggtctgagttcaggaacactgtggctcagctggttcatc
acctctcttgtaccttctctggtgtctattgtgcccctggctgctcttcttaagtggggt
cgaatcgtgaaattcaccagtctgggtgttttgatttttttcctcgtggcatttgctacc
gccaacatcatgctgtgtttcctcatgagtactttcttctccaaggccaacctggccgct
gtatgtggggggctgatatacttaagcctctacataccacccttactgtctctgacgttg
accaccaccaccaaggcagcaacaatttttgctagctttctgtctccagcggcctttgga
tttgcctgtcagtgtttctatccttctgaatcgcaaggcattgggatccagtggaatact
atagggtcaagtgtcagtgagaaaatctcactgaacttcggaatatttatcatgatgttt
tttgtggatgccttcatgtatgctgcagcagcctggtacattgaagctgtttttccaggt
caatatggcttgcccctgccgtggaacttcctctttgatatcaactattggaagggaatt
caagtggtgaaaagcaggcagatcccagttgcccctatggaggagaataaagattatgca
caacaccgtgaggaaatcttggattttgatcatgtagtaggatctttagcgagaaaagat
ctcattgaagctgacccaagtaacctggtccttggcgtcagcataaataacctggtgaaa
atctacaagaaaggagccgtgaaggctgtcgaccacctcaacctgaagttctatgagggg
cagatcacctcatttctgggtcacaatggagcaggaaaaactaccaccatatctgttatg
actggtatgttcccgcccacctcggggacggtctacatcaacggaatggacgtctgctac
caattgaacatcatccgaaagatcctgggtgtttgtccacaagacaatgtcctgtttgac
tttttaacagtgggggagcatctttggttttatggatgtctgaggggcaagccgaaagac
gaagtgaggttggaatgtgattcttggcttcaagaggttggacttctttgtaaacgccac
gaacttattaaaaacctctctggtggtatgaagaggaaactgttggtgatacttgctttc
gttggaggctccaaggtggttattttggatgagcctacagcaggagtggacccattttcc
cgtcggtccatctgggacttgttgctgaaatatcgcaagggtcgaaccataatcctctct
acgcactacatggacgaggcagaactccttagtgatcgtattgccatcatctcccaggga
aagctgtgctgctgtggctcaccgctttttcttaaatttaaactgggatctggctacacc
ctgactgtggtcaaaaaggacagcgattcatcaggggatagagacgcacccagacagggt
catagtctggatattgtggccaatagctcatccatggaagcgctgctggctctggcacag
cgtcactttcctactgccagccttgtgatggagtccttgcgtgaggcagtgatcaatata
ccccaggaggcctccatgaacaaccgcctagctgatttcctttctgaactggatcagaat
ctgggccaagttggaattatcacctatggattgtctgacactaaattagaggatatcttt
ctacgagttgtggaggaaactgagtatcagttggaatcagagctgcatgctgatcctcct
cagcaatcaacagagcagaatgatgaatttcaggagaaacatctgctgagtggatttggc
caaagaggcaccctgactggatggagcatgacctgccagcatctgagagctctctttatc
aaacgatggctgtatgctcgcagaaatactcaaagcttctttgctcagattgtgcttcct
gctgggcttttgctgggctttttggcaatctcggaccgaaaaaaaccccctactgaccaa
gtgggacagttgttaagtgcaggcattacaattccttttattttgatggtggctatttcc
tgtgtaccttcctgctccgtgcttttcctgattgaagaaagagccagtaaagcaacacac
ctccagtttgtcagtgggctccagccattcctctactggttgacaaacatttgctgggac
atgctgaactatgccgtcacagcctttctcatggtgctcatcattattgctttcaagata
gaaggatacacctctgacagcatactgcgggctcttatcctcctcctcctcttttatgga
tggtccgtcatccccatgatgtacccagcaacctttgttttctccgattccaccacggcc
tacattgttttttcctgtgtcaacctcttcagtggaattatttgcagtgcagcaacatat
tttcagataatgtctcaagttgaggccccaccgagttggacctggcatatgttattcatt
ttacctcattactccttgggaaaaggactcgtggacatacaaatccaaccgcaaataagt
atgctcatctttcacactccaagcccaatgagccgtgaacaattgcgagtgtttctgaag
acagcaaacgttgcgttgacgccagagttcttaggggttcgttcaagttcgcaaatgtta
gcccaaccattcttaaccaggcggtcgcctgtacttttattgttgcaaggaaattttgcg
atcttgtctatgaaaatacagggtttattgcttggcaacccatctgcgtttgtcctccag
tgttttggcctgctcggtgtcaatggcgcagggaagacttctacatttcgcatgctgacg
ggagacctgtcgatcacctatggagaggccttccttcaaaaccgcagtgtcatcagagag
atggaccgtgttcatcagctgatgggatactgcccacaatttgatgccatattcaaacta
ctgactggcactgagaatctggagcttcatgcccgtcttcgaggaatgcctgaggagtct
gtcacccaggtggctctgtggtgtttgaagaaagtgggacttagccagtatgccaagcaa
gaggctggaaactacagcggaggcaacaagagaaaactgtccactgcgattgccctcatc
ggtgctccgcttgttttatttctggatgaacccaccagtggcatggacgcaaaggcaaaa
aggttcatgtgggactgtttccgcaacttcaccaaaaagggaagagctgtcgttctgacc
tcccacagtatggaggaatgtgaggctctctgctccagaatggccatcatggtcaatggt
acgtttagatgtcttggctctgtgcagcacttgaagaacagatttggtgagggctacacc
attgcccttcgtctggcagagagtgaatccactccagacatgtgccctgtcaacagctat
atgaagaactgctttccaatgatcgatctgaaggaatgtcaccaaaccgtgctcacgtac
caactgccagagcacgcctgcagcctggctaaaatttttaaggtgcttgccaatcatgag
gcactaggcatcagcgcattctctatttcacagaccaacatggaccaggtgtttatcaac
tttgcaatggaacagtctgatgctgaagggcccacaaacatgatcgtcaataacgggact
caacagaccaacctgaccacacagcccagtcagatggcgcgtgcaagaatcccacacgag
tcaccaaatccactgccacaaaggaccactgcctctggcagaagaagcaagaaagccagg
aaagcatccaaatctcaattcaaagtaatgtag
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integrated database retrieval system
