Hippocampus comes (tiger tail seahorse): 109527136
Help
Entry
109527136 CDS
T04969
Name
(RefSeq) sodium channel protein type 2 subunit alpha-like isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hcq04040
]
109527136
Ion channels [BR:
hcq04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
109527136
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
ATP-synt_B
PFF1_TM
Zip
IQCJ-SCHIP1
Motif
Other DBs
NCBI-GeneID:
109527136
NCBI-ProteinID:
XP_019744420
LinkDB
All DBs
Position
Unknown
AA seq
1975 aa
AA seq
DB search
MAQLLVPPGPDSFRRFSRDSLAAIEQRIAEENAKKPKGEKRKRSDEDEPKPSRDLEAGKS
VPLVYGEVPKGMVSTPVEDLDPFYSNQKTFIVINKGNLIFRFNAAPALYILSPFNPLRRI
SIWILVHSLFSLVIMCTIITNCVFMTLSRPPDWAKNVEYTFTAIYTFESLVKILARGFCI
GKFTFLRDPWNWLDFSVIVMAYVTEFVSLGSFSALRTFRVLRALKAISVIPGLKTIVGAL
FQSVKKLSDVMILTVFCLSVFALIGLQLFMGHLKQKCVFMPVHNDSTINGTFSNGTYMNG
TDNSTQAFNWTEYSLDDQNYYYLPGKRDPLLCGNGSEAGQCPEGFSCIKVGKNPDYGYTS
FDSFGWAFLSLFRLMTQDFWENLYQQTLRASGKPYMVFFVLVIFLGSFYLINLILAVVAM
AYEEQSQATIKEAQEKEEEFQAMLEQLKRQQEDAQVATAVASAEHGEVSDHPGGTESSSE
TSKLSSKSAKERCNRRRKRKDEGKVPQSESQESIKKARCRFSVEPNVLNYDMKCSSAHQS
FLSIHGPPFSSRRNSRTSVFSFQSQSRDAGSENEFADDENSIFEDNRSRRTSLFFTRGRD
RQGSSISQSSFFPHPLLSPCRMKQSTVDCNGVVSIMGVDSIPLSPMGRFRPKLTLDRTSN
RDKADTTDTDGGTNQEWTDFPEDPRARDRTVSVASVITSTMEELEESRQKCHPCWYSFAN
TFLIWECCPIWLKIKKVVKLIVMDPFTDLTITICIVLNTLFMAMEHYPMTKDFSRTLSVG
NMVFTSIFTAEMVFKLIAMDPYYYFQEGWNIFDGIIVSLSLMELGLSNVVGMSVLRSFRL
LRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKDCVCKI
SSDCTLPRWHMSDFFHSFLIVFRVLCGEWIETMWDCMEVAGPTMCIIVYMMVMVIGNLVV
LNLFLALLLSSFSADNLAATEDDSDTNNLQIAIARIHKGIAFVKSLLQSTCNSVCLRSNE
QNQGEDKSSLEDFHKASGPNGIPNHTIKQLPRNGNGDVTGVDKSGDKYIVCSKTDDSIMS
FINNPSLTLNVPIAVGESDFENLNTEDFSSVSSDAAGCRVTINDDGQLSTSEASTVDLGE
KDGDSLDYELEESMEPDACFPDGCVQRFQCCQVNVEVGRWKIWWTIRKTCFRIVEHNWFE
SFIIFMILLSSGALAFEDVYIETRKTIKAMLEYADKMFTYIFILEMLLKWVAYGYAKYFT
NAWCWLDFLIVAVSLVSLVANAMGFAELGAIKSLRTLRALRPLRALSRFEGMRVVVNALL
GAIPSIFNVLLVCLIFWLIFSIMGVNLFAGKYYRCVNRTTDEPFLPTKVKNMTQCLALGK
DVARWKNIKINFDNVGLGYLALLQVATFKGWMDIMYAAVDSASKPGEQPAYEINLKMYLY
FVVFIIFGAFFTLNLFIGVIIDNFNQQKRKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKP
IPRPSNKIQAYIFDITTKQAFDVVIMVLIWLNMVAMMVETDDQSVKKKEILSWINGVFIC
VFTGECLLKMIALRQYFFTNGWNVFDFIVVVLSIIGMSLSELIEKYFVSPTLFRVIRLAR
IGRVLRLIKSAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKKESGID
DLFNFETFGNSMICLFQITTSAGWDGLLAPILNKYEDDCDSTTEHPGSAVKGDCGSPSVG
IAFFVSYIIICFLIVINMYIAVILENFGVATEESADPLSEDDFEVFYEVWEKFDPSATQF
MEYNKLSEFADALDPPLRIAKPNKIELISMDLPMVSGERIHCLDILFAFTKRVLGEGGEM
DILRAQMEERFMASNPSKMSYEPITTTLRRRQEDSSAVIIQRAFREHLRRRAADKTFAEA
KDDIPKDEKPVDKEDPVADKLHDVSGSDIKEPSTYHTSENDKAELDDKDGTQHDS
NT seq
5928 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagctgcttgtaccgccaggaccagacagcttccgccgctttagtcgcgattcc
ctcgcggccattgagcagcggatcgccgaagagaacgccaaaaagccaaagggagagaag
cgaaagcgcagcgacgaggatgaacccaagccgagtcgtgacttggaggcggggaagtcc
gtccccctggtgtacggggaggtcccgaaaggaatggtctccacaccggtggaagacctg
gatcccttctacagtaatcagaaaacgttcatagttataaacaaaggaaatttgatcttc
cggttcaacgcggctccagccttgtacatcctgagccccttcaacccccttagaagaata
tccatatggattttggtccactcgttgttcagcttggtgatcatgtgcactatcatcacc
aactgtgtatttatgacactgagtcggccacctgactgggcaaagaatgtcgaatacaca
tttaccgcaatctatacgtttgaatccctcgttaaaattttagcccgagggttctgcata
ggaaagttcacctttcttcgagatccatggaactggctggacttctctgtcattgtcatg
gcgtatgtcaccgagtttgttagccttggcagtttctcagctcttcgcacattcagagtg
ctgagagctttaaaagctatttctgtgattccaggcttgaagaccatcgtcggtgcactg
ttccagtcggtcaagaagctttctgatgtgatgatcctcactgtcttctgcttgagcgtc
tttgccctcatagggttacaactgttcatgggccatttaaagcaaaagtgtgtgttcatg
ccagtacacaatgattccaccattaatggcacattttccaatggcacctacatgaacgga
acagacaacagtacccaggctttcaactggactgagtactcacttgatgatcaaaactac
tattatctcccaggcaaacgggatccattgctttgtggaaacggcagtgaggctgggcag
tgtccagaagggttttcgtgcatcaaagtgggaaagaaccccgactatggttacaccagt
tttgactcgtttgggtgggccttcctttccctctttaggctcatgactcaggatttttgg
gaaaacctctaccagcagacattacgggcctctggaaagccctacatggtattctttgtg
ctggtcatattccttggctccttctacctaattaacctgatcttggctgtggttgcgatg
gcgtacgaggagcagagccaggccaccattaaggaggctcaggagaaggaggaggagttt
caggccatgctggagcaactcaagcgacagcaagaagacgctcaggtggccactgcagtg
gcgtctgcagagcacggtgaggtcagcgaccaccccggtggcacggagagctcctcagaa
acgtccaagctgagctccaaaagtgccaaagagcgatgcaacaggcgaaggaaaagaaag
gatgagggcaaggtcccacagtccgagtctcaggagagtattaagaaggcccgatgtcgc
ttctcggtggagcccaatgtgctcaactatgacatgaagtgctcgtcggcccaccagtcc
tttctgagtattcacggacccccattctcatccagacggaacagcaggaccagcgttttc
agtttccaaagccaatcacgagatgccggctcagaaaatgagtttgcagatgatgagaac
agcatttttgaggacaaccggagtcgaagaacctctttgttttttacccgggggcgtgac
cgccaaggcagcagtatcagccagtccagcttctttccacatccgctgctttcaccctgc
aggatgaaacagagcactgtagactgcaacggagtagtgtccataatgggtgtcgattca
atcccgttatcacctatggggcgctttcgtcctaaactgacactagataggacctccaat
agagacaaagctgacactaccgacactgatgggggaacaaaccaggaatggaccgacttt
cctgaggacccacgagccagggacagaactgttagcgtagccagtgtcataaccagcaca
atggaagagctcgaagaatcgagacagaagtgtcatccctgctggtacagtttcgcaaac
actttcctcatctgggagtgttgtccaatctggctgaagatcaagaaggtggtcaaactc
attgtgatggatccatttacggatttaaccatcaccatctgcattgtactcaacacctta
ttcatggccatggagcattacccaatgactaaggatttctccaggacgctgagtgtgggc
aatatggtattcacgagcatcttcacagcggaaatggtcttcaaactcatcgctatggat
ccatactactactttcaggaagggtggaacatttttgatggaatcattgtcagtttaagc
ttaatggagcttggtttgtccaatgttgttggaatgtccgtcttgagatcgttccgattg
ctacgggtgttcaagttggccaagtcgtggccgactctgaacaccctgatcaaaataatc
ggtaactctgtgggggctttgggaaacctgacgctggtgctggctattatcgtcttcatc
tttgccgtagtgggcatgcagctgtttgggaaaagctacaaggattgtgtgtgtaaaatc
tccagcgactgcaccctgccccgctggcacatgagtgactttttccattcgttcctcatt
gtgttccgagtgctttgtggggagtggatagagaccatgtgggactgcatggaggtggct
ggaccgaccatgtgcatcattgtctatatgatggtcatggtgattggaaaccttgtggtg
ctcaacctgttcctggccttgctgctgagttcattcagcgcagacaacctggctgccaca
gaggacgacagcgacaccaacaatttgcagatcgccattgcacggatccacaaaggcatc
gcctttgtcaaatccctgcttcaaagcacctgtaacagcgtctgcctcaggagtaacgag
caaaaccagggagaggacaaatcatccctggaggatttccataaagcttcgggacccaac
ggcatccccaaccataccattaaacagctaccgaggaacggaaacggggatgtgacaggg
gtggacaaaagtggggacaagtacatcgtctgcagcaagaccgacgattccatcatgtct
ttcatcaacaaccccagtctgactctcaatgttcccatcgcggtgggggagtccgacttt
gaaaacctcaacacggaggacttcagcagtgtctcatccgatgcagcgggatgccgtgtg
accatcaatgacgatgggcagctcagcacctccgaggccagcacagtggacttgggggaa
aaagatggcgactctctcgactatgaattagaggaatccatggaaccggatgcctgcttt
cccgacggctgtgtgcagaggttccagtgttgccaggtaaacgttgaggtgggcaggtgg
aaaatatggtggactatcagaaagacctgtttccggatcgtggagcacaactggttcgag
agcttcatcattttcatgatcctgctcagcagtggcgccttagcgtttgaggatgtctac
attgagaccaggaagaccatcaaagcaatgttggagtacgcggacaaaatgttcacctac
attttcatcttggagatgttactcaagtgggtggcctatggctacgccaagtatttcaca
aatgcctggtgttggctcgacttcctcattgtggctgtttcactggtcagtttggtggcc
aacgcgatgggatttgctgaacttggggccatcaagtctctgagaaccctgagagctctg
aggcccttgagagccctttcgagattcgaggggatgagggtggttgtcaacgcacttctt
ggggcaattccttccatcttcaatgtcctgttggtgtgcctcatcttctggctcattttc
agtatcatgggcgtcaacttatttgcgggaaagtactaccgctgtgtcaacagaaccaca
gacgaacctttcctgcccactaaagtgaagaacatgacgcagtgtttggccttggggaaa
gatgttgctcgctggaagaatattaaaatcaactttgacaatgttggactgggttacctc
gcacttctacaagtggctacgtttaagggatggatggacatcatgtatgccgcagtcgat
tccgcaagcaagcctggagaacagccggcatatgagatcaacctgaagatgtatctgtat
tttgtggttttcatcatattcggtgccttcttcacactcaatctcttcattggtgtcata
attgacaatttcaatcagcaaaagcgaaagtttggaggccaagacatcttcatgactgaa
gaacagaagaaatactacaatgccatgaaaaagctgggctcaaagaaaccacaaaaaccc
attcccagaccatcgaacaagattcaagcctacatatttgacatcaccacaaaacaagca
ttcgatgttgtgatcatggttctgatatggctgaacatggttgccatgatggtggaaact
gatgaccagtcagttaaaaagaaagaaattctcagctggatcaacggggtgttcatttgc
gtcttcacgggcgagtgtttgttgaagatgatcgcactgcgccagtactttttcaccaac
ggttggaatgtttttgatttcatcgtcgtcgttctctcaattattggtatgtctctctct
gagctgattgagaaatattttgtgtcgcccacgttgttcagagtcatccgactggctcga
atcggacgagtcctccgccttattaaaagtgccaaaggaatccgcactcttttgtttgcc
ttgatgatgtcacttcctgccttgttcaacattggtctcttgctctttttggtgatgttt
atctacgccatctttggcatgtcaaactttgcttacgtgaagaaagaatccggcatcgat
gaccttttcaatttcgagacgtttggcaacagcatgatctgcctgtttcagatcaccacc
tcggccgggtgggacggcctactggctcccattctcaacaaatacgaggacgactgcgac
agcaccaccgagcatcccggcagcgctgtcaaaggagactgcggatctccttccgttggc
atcgccttctttgtcagctacatcatcatctgcttccttatcgtgatcaacatgtacatt
gccgtcatcctggaaaactttggcgtagccaccgaggaaagcgccgacccgctgagcgag
gatgattttgaagtgttttacgaggtttgggaaaagtttgatccgagcgcaacccagttt
atggagtacaacaaattgtccgagttcgccgatgccttggacccgccgctgcgcatcgcc
aagccaaacaagatcgagctcatctccatggatcttcccatggtgagtggcgaacgcatc
cactgcctggacatcctcttcgcgttcactaaacgggttctgggcgaaggtggggagatg
gacatactcagggcacaaatggaagagagattcatggcctccaatccttccaaaatgtcc
tatgagcccatcacgaccacccttcgccgcagacaggaggactcgtcggccgtgatcatc
cagagagctttcagagagcatttgaggagacgcgctgccgacaaaaccttcgcggaagcc
aaagacgacattcccaaggacgaaaagccggttgacaaagaagatccagtcgcggacaaa
ctccatgacgtctctggctcagacattaaggagccttcaacctatcacacgtcggaaaat
gacaaagccgaactggatgacaaagacggcacgcagcatgattcgtaa
DBGET
integrated database retrieval system
