Hippocampus comes (tiger tail seahorse): 109528881
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Entry
109528881 CDS
T04969
Name
(RefSeq) platelet-derived growth factor receptor beta-like isoform X1
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq04010
MAPK signaling pathway
hcq04020
Calcium signaling pathway
hcq04510
Focal adhesion
hcq04540
Gap junction
hcq04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
109528881
04020 Calcium signaling pathway
109528881
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109528881
04540 Gap junction
109528881
09142 Cell motility
04810 Regulation of actin cytoskeleton
109528881
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
hcq01001
]
109528881
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
hcq04090
]
109528881
Enzymes [BR:
hcq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
109528881
Protein kinases [BR:
hcq01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
109528881
CD molecules [BR:
hcq04090
]
Proteins
109528881
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
ig
I-set
Ig_2
V-set
VEGFR-1-like_Ig-like
Motif
Other DBs
NCBI-GeneID:
109528881
NCBI-ProteinID:
XP_019747483
LinkDB
All DBs
Position
Unknown
AA seq
1015 aa
AA seq
DB search
MRAESGVMPAPLRAGTGSLKVLHFLLAVLVGLPEQGVSLELIPLASQVLLQPQSNFTVVC
SGWSEVSWRLPRQELEEGNAAVEKEGSRSVLQLFNVTWRNSGRYACEESASDQVREMDIF
VPGRGPHEWFVPAGSGVVMKDGEEATIPCAVSDPLLNVSLYRRGDKTPASGPTYEPGRGF
TGRLDDSSYVCVASSGSEETRSQVYYVFSVVVAKAMEVNLTASGSVLKRGQALLVNCTVR
HVDMVYFSWKFPRSEEFESLTEFLPDRIRSFVNIPSATLADSGVYACAVQESLQGRRVEK
NITVIILDRGYVSARATHDTNVSSLVGHTVALRVAADAHPPPTVAWHKDNRSVIVTAGTT
VVSTARVSDGRYVSTLTLARVRLEQTGSYTASIFNEDEREDVIFYLQVRAPPRITSLTET
SAGAMLCVSEGAPPPSVTWFTCHSAHGCANGTGRWTSQSGTGKGALLQENVTVLADGGLT
QVRSLLIPDSPKTLTAVRCEASNSAGRRARDLRLVSTSLLSQVAMLALVLVLGLIAIIFL
VILVILWRKKPRYKVRWKLMESVSPDGLECVYLDPDRLPYSAAWEIPREDIELGEDLASG
AFGRVVEARVSGLLRDRKTTRVAVKMVKSNSGARRSLLSELKLLCHLGPHVNIVNLLGAC
TSGGPVYVVTEFCCHGDLAGYLRRHKRAFVHDDALAKREADGGYMDMSKQEGAAIVGDSE
NAASAQDQQVASSSSLLISDSTALDRSDLCSFSFQVASAMNFLSSRNCVHGDLAARNVLV
CEERLVKVGHFGPARDPLEDRDYVARGRASLPLKWMAPESVFHGAYSSRSDVWSYGVLLW
EIFSLGDSPYSDLPAPRRFYAALKRGHRLAPPPHADSNISDMMQACWSERPASRPSFASL
AASLDAMLTDDRRKAYAELTDRFLTGDHPAVVRSRLASAAVDAPSDGDGATPSREENARL
HRPEAGPSHGERGLPEDTDRREGECGAALDAERAEEPLAAREVTSSGESEAESCV
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgccgagtcgggagtcatgccggcgcccctgcgagcaggaacaggaagtctgaaa
gtgctgcacttcttgttggcggtgctcgtgggtcttccggaacagggcgtcagtctggag
ctgattccactggcctcgcaggttctgctccagcctcagtccaacttcaccgtggtgtgt
tccggctggagcgaggtgtcctggcgcttgccgcggcaggagcttgaagagggcaacgcg
gcggtggaaaaggagggatcccgcagcgtcctgcagctcttcaacgtcacctggaggaat
tccggcaggtacgcctgcgaggagtcggcgtccgatcaggtcagggagatggacatcttc
gtacccggacgaggtccgcacgagtggtttgtcccggcgggttccggcgtggtgatgaag
gacggggaggaggccaccatcccctgcgccgtgtccgatccgcttctcaacgtcagcctg
taccggcgcggggacaaaacgccggcgtcgggaccgacgtacgagccgggccgcggcttc
acgggacgcctcgacgactcgtcttacgtgtgcgtggcctccagcggctctgaggagacg
cgctcgcaggtctactacgtcttcagtgtcgtggtcgccaaggcgatggaggtgaacttg
acggcatccggcagcgtgctgaagcgcggacaagcgctgctcgtcaactgcaccgtccga
cacgtcgacatggtctacttctcttggaagttcccgcggagcgaggaatttgagtctctc
acagaatttctgcccgatcgaatccgttcgtttgtgaacatcccctcggcgacgctggca
gactccggcgtgtatgcgtgcgcggtccaggaaagtctgcagggacggcgcgtggaaaag
aacatcacagtcatcatactggatcgtggttacgtttccgcgcgcgcgacccacgacacc
aacgtgtcttcgctggtcggtcacacggtggcactgcgggtggcggcggacgcccaccct
ccgcccacggtggcgtggcacaaagataaccggagcgtcatcgtcaccgcgggaacgacc
gtcgtgtccaccgcacgcgtgtcggacggcagatacgtcagcactctgaccttggcgagg
gtccgcttggagcaaacgggaagttacacggccagcatcttcaatgaagatgaacgggag
gacgtgatcttctacttgcaagttcgagcgcccccgaggatcacgtcgctgacggagacg
agcgctggggccatgttgtgcgtcagcgaaggagctccgcccccttctgtcacctggttc
acctgtcacagcgcacacgggtgcgccaacgggacaggtcgctggacgagccaatcgggt
actgggaagggcgcgctcctgcaagagaacgtcaccgtcctggcggacgggggcctgacc
caggtgcgcagcctgctgatcccggacagccccaagaccttgaccgccgtccgatgcgag
gcctccaactctgcgggacgacgagccagagacctccggctggtgtccacttctcttttg
tctcaggtggccatgttggcgctggttctggttctggggctcatcgccatcatcttcctg
gtcatactcgtcatcctgtggagaaaaaaacctcgctacaaagtccgctggaagctgatg
gagtccgtcagccccgacgggctggagtgcgtctacctggaccccgaccggctgccctac
agcgccgcctgggaaattcccagggaggacatcgagctaggtgaagacttggcgtcggga
gctttcggacgagtggtggaagcccgggtgtcgggtctgctccgggaccgcaagaccacc
agagtggccgtcaagatggtcaaatccaacagcggcgctcgtcggtcgttgttgtccgag
ttgaagcttttgtgtcacctgggccctcacgtgaacatcgtcaacttgctcggagcgtgc
acgtccggaggtcccgtctacgtcgtcactgagttctgttgccacggagacctggccggc
tacctgcgacgccacaaacgcgcttttgttcacgacgacgcactcgccaagagagaggca
gacggcggttacatggacatgagcaagcaggagggcgcagccatcgtcggcgacagcgag
aacgcggcgtcggctcaggaccagcaggtggcgtcgtcgtcgtcgcttctcatcagcgac
tcgaccgcgctcgaccgaagcgacctctgcagcttctccttccaggtggccagcgccatg
aacttcctgtcgtcacgcaactgcgtccacggagacctggcggcccgcaacgtcctggtg
tgcgaggagcggctggtgaaggtgggccacttcggcccggctcgggacccgctcgaggat
cgggactacgtggcccgaggacgcgcctcgctgccgctcaagtggatggcgccggagagt
gttttccacggtgcgtactcctcccggagcgacgtgtggtcctacggggttctgctgtgg
gagatcttctctttgggcgacagcccgtattcggacctgcccgcgccgcgccgattctac
gccgcgctgaagagaggacaccgcttggcgccgccacctcacgccgactccaacatttcc
gacatgatgcaagcgtgctggagcgagcgtcccgcttccaggccgtcgttcgcgtcgttg
gcggcgtcgctggacgccatgctgacggacgaccgcagaaaggcgtacgccgagctgacg
gaccgcttcctgacgggcgaccatccggccgtggttcggtcccgactggcgtcggcggcc
gtcgacgcgccgagcgacggcgacggcgcgaccccgtcgcgtgaggaaaatgcgaggctt
caccggccggaggcgggaccttcccacggtgaacgcggccttcccgaagacacggacaga
cgcgagggcgagtgcggcgccgcgctggacgccgaaagagccgaggagccgctggctgcc
cgtgaagtgacgtcgtcgggcgaaagcgaggcggaaagctgtgtttga
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