Hippocampus comes (tiger tail seahorse): 109532127
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Entry
109532127 CDS
T04969
Name
(RefSeq) laminin subunit alpha-3-like
KO
K06240
laminin, alpha 3/5
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq04382
Cornified envelope formation
hcq04510
Focal adhesion
hcq04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109532127
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109532127
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
109532127
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_II
EGF_laminin
EGF_LMN_ATRN
Laminin_G_3
DUF6847
TolA_bind_tri
Motif
Other DBs
NCBI-GeneID:
109532127
NCBI-ProteinID:
XP_019752346
LinkDB
All DBs
Position
Unknown
AA seq
1674 aa
AA seq
DB search
MPRNIIFWLYFWGCLLARVCLCVVRQRPQSGKRFCELSPSDQTGGLIAQKCSSGFYREWS
GPLRGQCVPCSCNGLSDQCDELTGKCVNCRFHSAGDHCERCQEGYHGDAAQKTCRPCLCP
FTWNNQALACLHVGSGVVECLCKRGYAGSRCERCAFGYYGDPAVHGGSCKPCECDRGGDG
NICHSSTGECISPGNNSCEDHFHTLKCCTEALLLRLRANEGDLRGITHISLPVSTLIHPK
GIVSDAERVMKTYSGATRQLELKAEQLEEDVNTIRDDLDHLTHKAHQMSSRVNEALQSGK
GPKMVAKVVLGHAESVLASLRDLIKRPSQAADAIRLEGRDKATVMEGAHRLVEEMSHRVC
VEATTRGQSRGRMMKMAKKLLVAITKMAAARPNQQTLNQTADSLRASQDLLRHMSDLLSG
AKVAVRRARRFHLRSASIMRHLQPGHDQTTTKARSLPSVIESTRTHWIENISTIFFELQD
GKKGFEKDAARLDGAKQQLRKRINTIYHLLAKIKIIAEAEEHARELGRSATHMKITLPTA
NSTKRPSEHNALGDITTDIEEAEMAAHRCHAAADKAFKDVMRSGLRLTTEALRDDSTRLW
TAANHTQNDFRKLSHSLNVHKDSMKRRRDKGEALRFDISSVSDEIKSLQKDDVDVLIESV
KREASATNDTVTHVTYRLMNMRQEMDKLTLNNSALAFNNVLNDIQHAVTTLDWELPVVRE
KLAQVEALGKRLPTRGNMTENISRIKDLVQETRSYLNRLSLATRFTGKSHIELHPPSDAE
DAKAFTAVDLLLSVEKKPAEHRRKRQDKWRDDNMFVLYLGADDASGDYIGMAIRRGVLIC
VYKLHGHVHEVAAGPITTFTGVHASALDRVVFHRVYHDAEVNITANFTSEQPIPYAPKRH
LPNTMSSILDLDPQRTVFYVGGYPQHFTPPEELRYPGYRGYVKLLYFNDQPLCLHNNKRA
VNTEAGVHALMLPRAEVSHFYRGSGYRQVLMKEPHDRRRRIFKLHTNSRETDALLFYMGT
EETFWCLLVEQGHLVLQSQYAGMKERARRNDKVSLFDKHFVITIDDTITVHYEDKHISIK
HVHTPFESYYIGGVPQHIGSRHDISAPPLRGCVAHVSADGQTVEYNATVGVSDACPFGLL
GVRTATLHSPLSADWLFAPDQQHLALGFRSKHKHGVILRSGSQSSSRGHISLADGFLQLS
LGHHNVISAERYDDGRWHYVCVAQTPRLEVKVDNVDIALHTLKREPEVNQGQEFKGCITN
LYSRTARSFTPVDLSSLPPTGGVGLGHCRLSSPTQTGRLPTDVSRQLQMLRQTAEQTDDE
CARQRVPRRGYEFSQRDSWLAYKLPQQDLNYRPHFSLDVKTKSSKGLILFVEGTGPVPLL
ALYVTNGKIKMSLGPSRVIHHKLKTNDGHWHRVECSVERNTFHLLVDGVRVTDGHLPNEE
GSSLNFHDLVYLGGHPGATEGPTILLKSISGCVRDFRMNNQPVGKPEGARAVSPCSDGLT
ERGAYFGGGHVVLLDNSFAVGDHFALTFELRPRRLTGLLFHARGHKTSFDVFLINNTVGV
AVNDGGGSVSVALTPQNLCDGEFHVITVSTGQKDLTLMVDAASEKKAGSFASFPSSMTQA
LLHVGGATDFLGAPLTSPYIGCLRNVIINGRHVAFETRVVRVLGLVDVKECPAH
NT seq
5025 nt
NT seq
+upstream
nt +downstream
nt
atgccaaggaatattatcttctggctttacttttggggctgtttattggcacgtgtttgt
ctctgtgttgtgcgtcagaggccacaaagcggcaaaaggttctgcgaactatccccgagc
gaccagacgggaggcctcattgcgcagaagtgcagttcaggcttctacagggagtggagc
gggcctctccgaggtcagtgtgtgccatgtagctgcaacggactctccgaccagtgtgac
gagctcacggggaagtgtgtgaactgtcggttccactcagcgggcgaccactgtgagcga
tgccaggagggttaccatggcgatgctgcccaaaaaacttgccgcccttgcctatgtccc
ttcacgtggaacaatcaggctttggcatgcctgcacgtcggctccggggtggtcgaatgt
ttgtgcaaacgcggctatgcgggatccagatgtgagagatgtgcatttggttactatggc
gacccagcggtccatggaggcagctgcaagccatgcgagtgcgacagaggtggcgatggg
aacatttgtcattcctcgaccggagaatgcatctcacctggcaacaacagctgtgaggat
catttccacaccttgaagtgctgcactgaagctttactcctccgcctgagggccaacgag
ggcgacctgcgtgggatcactcacatctcccttcccgtttcaacgctgattcaccctaag
gggatcgtctctgacgccgagagagtaatgaagacttacagcggcgcgacgagacagttg
gagctcaaggctgagcagctggaggaagacgtcaacacgatcagagacgacctggaccat
cttacacacaaggcccatcaaatgtcttcccgtgtgaatgaggcacttcaaagtggcaaa
ggaccaaaaatggttgccaaggttgttctcggtcatgccgagtctgtcctggcatcatta
cgagatttaataaagcggccgagccaggctgcagatgccatcaggctcgagggaagagac
aaggcgaccgtgatggaaggggctcaccggctcgtggaggaaatgagccacagggtctgc
gtagaggcgacgaccaggggccaaagccggggccggatgatgaagatggcgaaaaaattg
ctggtcgccataaccaagatggcagctgcgagacccaatcagcagactctgaatcagact
gcagactctctgagggcgtcacaggatcttctcagacacatgtctgaccttctgtcaggt
gcgaaggttgcagttagaagagcaagacgttttcatttgaggagtgcttccatcatgcga
catctgcagcctggtcacgatcaaaccacaacaaaggcacgttccctcccctcagtgatt
gaaagcacaagaacacattggatcgagaacatctccaccatcttcttcgagctgcaggac
ggcaaaaagggcttcgagaaggacgcggctcggttggacggcgccaagcaacagctgcgc
aagaggattaataccatctaccatcttctggccaagatcaagatcatcgccgaggctgag
gagcacgcacgggagctaggccgatcggccacgcacatgaaaataacgcttcccacggcc
aacagcacaaagcggccgagcgagcacaacgcgttgggcgacatcacgactgacatcgag
gaggcagaaatggccgcgcatcgatgccacgcggccgctgacaaagccttcaaggatgtg
atgcggagcggtctgcgattgacgacggaggctctgagagatgattccacccgcttgtgg
actgcggccaatcatacccagaatgacttcagaaagctctcacattcactgaacgtgcac
aaagatagcatgaaaaggcgcagagacaaaggagaagcgctgcgatttgacatctccagt
gtgagtgatgaaatcaaaagcctccaaaaagatgacgtggacgtcctcatcgaatctgtc
aaaagagaagcttctgctacaaatgacaccgtcacccatgtcacttacagactgatgaat
atgagacaggaaatggacaaactgactttgaacaacagtgctctggctttcaataacgtt
ttaaatgacatacaacatgctgtgacgactttggactgggagctcccggtggtgagagag
aagctcgcccaggtggaggcccttggaaaaaggctcccaacgagaggcaacatgacagaa
aacatcagcaggatcaaggacctggtccaggagacgaggagctatcttaacaggctctcg
ctcgccacccgtttcaccggaaagagtcacattgaacttcatccgccgagcgatgccgaa
gacgcgaaagcctttacggccgtcgacctccttctcagcgtggaaaaaaagccggcggag
caccgaagaaagcgtcaggacaaatggcgagatgacaacatgtttgttttgtatctcggg
gccgacgacgcatctggcgactacatcgggatggccatcaggcgcggcgtcttgatttgc
gtctacaagctacacgggcacgtccacgaggtggcggctggtcccataacgacgttcacc
ggcgtgcacgcctccgctttggaccgcgttgttttccacagagtataccacgacgctgaa
gtcaacattacggcaaacttcacatcagagcagcctatcccatacgcccccaaacgtcac
cttccgaacaccatgagcagcatccttgatctggatccgcaacgcacggttttctacgtg
ggcggataccctcaacatttcacccctcccgaggagctgcgctaccccgggtaccgaggc
tacgtgaaactactctacttcaacgaccagccactttgccttcacaacaacaagcgcgct
gtcaacacggaggccggtgtgcacgctctaatgttacccagagccgaggtgtcccacttc
taccggggaagcggctaccgccaggtcttgatgaaggaaccgcacgacaggaggagacgc
atctttaaattgcacacaaacagccgggagaccgatgccttgttgttctacatgggtaca
gaagagacattttggtgcttgctggtggaacaaggccacctggtgcttcaaagtcaatac
gcggggatgaaggagagagcccgcaggaatgacaaagtgtctctttttgacaaacacttc
gtcatcaccattgatgacacgatcacggtccactatgaggacaagcacatctccatcaag
cacgttcacactccttttgaaagctattatatcgggggggtgccgcagcacattggaagc
agacacgacatcagcgctccgccactgagaggctgcgtggctcacgtgagcgccgatggc
caaacggtggagtacaacgcgacagttggcgtcagcgatgcttgtccctttggactgctg
ggagttcgcacagccactttgcattcgcctctttcggctgactggctttttgcaccggac
caacaacacttggctctaggattcaggagcaagcacaaacacggcgttatcctcaggagc
ggctctcagagctcctcccgaggtcacatttctctggccgacggcttcctgcaacttagc
ctggggcatcacaatgtaatttcagcagaaagatacgacgacgggagatggcactacgtg
tgtgtggcgcagacgccgaggctggaggtcaaagttgacaacgtagacatcgccctccac
acattaaaacgggagccagaggtgaaccagggacaagaattcaaaggctgcattaccaac
ctttactccagaacggcgcggagctttacacccgtggatttgagttctctcccgcctacg
ggaggtgtcggcctgggtcattgccgtctcagctcacccacgcaaactggacgtttaccc
acagatgtgagcaggcagctccagatgctcagacaaaccgcggaacaaacagacgacgag
tgcgcacgtcagcgagtgccccgccgcggctacgagttctcgcagagagacagctggctg
gcgtacaagctaccccagcaggaccttaattacaggcctcacttctctctggatgtcaaa
accaagtcctccaagggtctcatcctctttgttgagggcacagggccggtgcccctgcta
gctctgtacgtgacaaacggcaagattaagatgtcacttgggccgagcagagtcatccac
cacaagctgaagacaaacgatggacactggcacagagtggagtgcagtgtcgagaggaac
acgttccatcttctggtagatggcgtccgcgtgactgacggccatttgcccaatgaggag
ggctcgtccttaaacttccatgaccttgtctacctcgggggtcatccaggggctactgaa
gggcctacaattctcttgaagagcatctcaggctgtgtgagggacttcagaatgaacaat
cagccggtgggcaaacctgaaggggcccgcgcggtgtcgccctgctcggatggcctaacg
gagaggggggcgtactttggcggcggtcatgtcgtcttattagacaattcctttgcagtg
ggtgatcactttgcgttgaccttcgagctgcgaccccgtcgcctgaccggccttctcttc
cacgcacgaggccacaaaaccagcttcgacgtgttcttaattaacaacacggtgggcgtc
gctgtgaacgatggtggcggcagtgtcagcgtcgcgctgactccacagaacctctgcgat
ggggaatttcatgtgattacggtttccacaggacaaaaagacctcacgctaatggtggac
gccgcgtctgaaaagaaggcaggatccttcgcatcatttccctcctctatgacgcaagca
ttacttcacgtaggaggggccacagattttcttggtgcccccctgacttcgccgtacatc
ggctgcctgagaaacgtgatcataaacggcaggcacgttgcatttgagacgagggtggtc
agggtgctcggcctggtggacgtcaaagaatgtcccgcccactga
DBGET
integrated database retrieval system