Haliotis cracherodii (black abalone): 139463957
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Entry
139463957 CDS
T10814
Name
(RefSeq) superkiller complex protein 3-like
KO
K12600
superkiller protein 3
Organism
hcra Haliotis cracherodii (black abalone)
Pathway
hcra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hcra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
139463957
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcra03019
]
139463957
Messenger RNA biogenesis [BR:
hcra03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
139463957
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_16
TPR_19
TPR_2
TPR_14
TPR_1
TPR_17
TPR_11
TPR_CcmH_CycH
TPR_8
TPR_12
ANAPC3
TPR_9
ARM_TT21_C
TPR_15
ARM_TT21_2nd
Utp8_C
MUS81-like_WH
DUF5344
FAT
Retrotran_gag_2
Motif
Other DBs
NCBI-GeneID:
139463957
NCBI-ProteinID:
XP_071101530
LinkDB
All DBs
Position
Unknown
AA seq
1548 aa
AA seq
DB search
MDSKEVKNALKNAREAIRNKEFKEALRHCKTVLASDKTNYNALVFVGVAAEGLEQADQAL
KAYKKAIDAAPEQILAWQGLCGFYEKNPSPDNDADLASVYKKLMSLQASDKEKMLDIGRK
LAQVHGKLGNVDEAVSMYRHVLSEDQAGQQRMNALMSLFDVLHSQKTLSTEYQELMLKTC
KEAVSLEDLPAEGSERLIQQYLELLVKQGPRSSLWEECRSLHDRYPANLCVLETWTLLLL
EEHLQGSDDSVSSTLRDVSQKLGALSVSSPYVSLSQGVIQLADQKLVEARDLLQQGMNSL
TSVVSGYVFLARCHQQLHTNMACVEVADKGLKALEKKNRLLTVPSKSITCELQLLKATCL
YRIGSPHCLAEAREILSQDVIESPESRSLLVYICLKQGNIADAQHHLGNVPETDGEREAL
RGRILFHTGKHQEALTRFEKLTEDAPDVSGHQYMLGRVLWQLRDTEGQDGVQERCFKAFL
KAAKLDPYNSDIFLYLGHFYATVQKQNVKAKRCYQKAYDLDPANEEAGAALCDILVAIGE
DEEARALLEAATSQANAGCGKWAWLRLGLYQVRHDDPTIAVASFQAALRADPRDNHVWEC
LAEAYLHRGSYTAALKTFTKAAELNPESVYSLFQIASIKQTLGEYPEAVAEYKTILEKSH
NYVPALKGLGETLLLLARQHLTTCLDGLARDKCQEALVYLTRAASQRADLSCLWKLMGDA
CTVLQPLAPETFSLQLPAKLVQQSSQDMVSLGKMEVLQVGARCYGRALKSIPESASLWHD
LGVNYFHQSELSTSASVELSQKAIQALKKAISLDPNNFRHWNALGVVVCAKYCYKPELAQ
HCFIKSIEVESNNVVAWTNLGTLYLKNDNVQLAHEAFKVAQSLDPSYVACWIGQALIAEI
VGHDDAMDLFRHTTELGSNVEGAVGYASWVCQVLQDRSKRNTDLFRYSIKQMAAIPAASD
ALARYTGRVKTDMAAYNMYGLLLEHQKLYGGAAEAFRSAVEILEKDSTQTEQLGKVRINY
GRVLCKGGNYKESVEQLGKAGSLEKCEDLCFHGLAHYKLGRFEDSYQAYNMALGMAELDE
DKSHIYSALGMVAYRFGDVEGAKTALFNGSQQAPPSALGLQALCSLGLLQSDATLATAAI
QELFKLGDKDPSLPDVTWLSAAVCILQGNLKEAKRSIQRVIQKNPSCPRLWRVLSSILSS
FFPDLGDAASHCARASQDLAHSEDKSVSTLLTVGQLQGGLHSRCDTRNNALSSAQKALHL
HPDKVSNQCSLIAAVHAEAVLSGDERRRQLLNIEQQRIQGVLESGHSPQPGVALWCWRQR
VVSLILSNKGSEAKEALQQFSCLPTATDSSGLFAEVLEGALTDDLQAVQGKVCMEGRQLY
LWQVLTEMYLQKGLMAEADTTIRHTLQLAQADSQRQVQLESLLKLASLSYQQIMSGSGDK
QQLRSVFDEAAAEVLKIDPGCSAVLLMMGALSIKSNKVSRRHYQRALIAGSVRSSRGHDV
SLARQAVIRNIIYSQKDLPLAKKIADEAVCDGDEATVNLYSQLKGDED
NT seq
4647 nt
NT seq
+upstream
nt +downstream
nt
atggattccaaggaagtaaagaacgctttgaaaaatgcaagggaggcaattcgaaataaa
gaatttaaggaagcactccgacattgcaagacagtgctagctagtgacaagaccaactac
aatgccctggtgtttgtgggcgtggctgctgagggtctggagcaggctgaccaggcactg
aaggcttacaagaaagccatagatgcagcacccgagcagattctagcatggcagggtctg
tgtgggttttacgagaagaacccttctcccgacaatgatgctgacctggccagtgtgtac
aagaagctgatgtctctacaggctagtgacaaggagaagatgctggacatagggaggaaa
cttgcccaggttcatgggaaactggggaatgtggacgaggctgtgagcatgtacaggcat
gtgctgtcagaggaccaggctggacagcagcgcatgaacgcactcatgtctctgtttgat
gtcctacatagtcagaagactctctctactgaatatcaagaactgatgttgaagacatgc
aaggaggcagtatcattagaagatctgccggcagagggcagtgagagactgatacagcag
tacctggagctgctggtcaagcaaggtccccggtccagcttgtgggaagagtgtcgaagc
ctccatgaccggtaccctgccaacctctgtgtcctggagacctggactctgctgctgcta
gaggagcacctccagggttctgatgacagtgtcagctccacactgagggatgtgtctcag
aaacttggagctctatcagtcagcagcccatatgtgagtctgtcccagggagtgattcaa
ctggcggaccagaagctggtggaggccagagacctgctgcaacaaggaatgaacagcctc
acgagtgttgtgagtggctatgtgttcctagcgagatgtcaccagcagttacacacaaac
atggcatgtgttgaagtcgctgataaaggactgaaggcactagagaagaagaaccgccta
ttgacagtgcccagcaaatccatcacctgtgaactccagctcctgaaagccacctgtttg
tacagaatcggttcaccccactgtctggctgaggcaagggagatcttgtcacaggatgtg
attgaaagtccagagtctagaagcctcctggtatacatttgtctgaagcaagggaatata
gcagatgcacagcaccacctgggcaatgtgccagagactgatggtgagagagaggccctc
cgtggccggatcctgttccacacgggcaagcaccaggaggcgctcacacggtttgagaag
ctgactgaggacgcccccgatgtgagtggacaccagtacatgctggggcgagtcctgtgg
cagctccgagacactgaaggccaggatggggtgcaggagagatgtttcaaggcctttctt
aaggcagccaaacttgacccctacaatagtgacatattcctctacctgggacacttctac
gccactgtgcagaagcagaatgtaaaagccaagcgttgctatcagaaggcgtacgacctt
gaccctgctaatgaggaggctggagctgcactctgtgacatcttggtcgccattggtgaa
gatgaggaagccagggcccttctggaggctgctacaagtcaggccaatgctggctgtggc
aagtgggcctggctgaggctaggtctgtaccaggtgcgacatgacgaccccaccatcgcc
gtggcatcattccaggcggcgctcagagcagacccccgagacaaccatgtgtgggagtgt
ttggccgaggcctacctgcaccgggggagctacacagcagctctcaagaccttcactaag
gcagctgagttgaacccagaatcggtgtacagtctcttccaaattgccagcattaagcag
accctaggagaataccccgaggctgtggccgagtacaagaccatcctggagaagtcccac
aactatgtgccagcactcaaaggtcttggtgaaaccctgttgctgttggcgcggcaacac
ttgaccacctgtctggacggcctggctcgggacaagtgtcaggaggccttggtttatctg
accagagctgcgtcccagcgtgcggacttgtcctgcctgtggaagctgatgggggatgcc
tgtactgtgctgcagcctctggccccggagacattcagtctgcagcttcctgccaagctg
gtccagcagtcgtcccaggacatggtgtccctggggaagatggaggtcctgcaggttgga
gccaggtgctatggtagagccttgaagagcattccagagagtgcctctctctggcatgac
ctgggggtcaactatttccaccaatcagagctgtccacatcagcatcagtagagctatcc
cagaaagccattcaggccctgaagaaagctatcagtcttgaccccaacaacttccgccac
tggaatgccctgggggtagtggtatgtgccaaatactgctacaagccagagctcgcccag
cactgcttcatcaagtccatagaagtggagagtaataacgttgttgcctggaccaacctg
ggaacattgtacctgaagaatgataatgtgcaacttgcccatgaagcgttcaaagtagcc
cagagtcttgacccaagttacgttgcttgctggattggacaggccctgatagctgagata
gttggacatgatgacgccatggacctgttccgtcacacaaccgaactaggcagtaatgtt
gagggagccgtgggctatgccagctgggtatgccaggtattgcaggatcgcagcaagagg
aacaccgatctgttccggtacagcatcaaacagatggccgccatccccgctgcatcggat
gctctggccagatacacaggtcgtgtgaagacagacatggcagcgtacaacatgtacggt
ctgctcctggagcatcagaagctgtacggcggcgcagccgaggccttcaggagtgctgtg
gagatcctggagaaggactcgacccaaactgagcagctgggtaaagtcaggatcaactac
ggaagagtcctatgcaagggaggtaactacaaggaatcagtggaacagttggggaaggcc
ggaagtctggagaagtgtgaggacctgtgtttccatggcctggctcactacaagctgggc
agattcgaggacagctaccaggcctacaacatggcccttggtatggctgagctggatgag
gacaagtcccacatctactccgcactaggcatggtagcctacaggttcggtgatgtcgag
ggtgccaaaacagcactgtttaatggatcccagcaggctcctccgtcggctctagggctc
caggctctgtgctcgctagggctgctgcagtctgatgccaccctcgccacggcagccata
caggaactcttcaagctaggagataaagatccatcactaccagacgtcacctggctgtct
gctgctgtgtgtatactgcagggtaatcttaaagaggccaagcgttctattcagagagtt
attcagaagaacccatcgtgtccgcggttatggcgagtgttgtcttccatactgtccagt
ttcttcccggaccttggagacgcagcatcccactgtgcacgggcctcacaggatctcgct
cactctgaagacaagtcggtgtccactctgttgaccgtgggtcagctccagggcggactc
cacagcaggtgcgacacacggaacaatgctctgtcctctgcacagaaggctctgcacctc
catccagacaaggtgtccaatcagtgcagcttgatcgcagctgtccatgctgaagctgtg
ctgagtggtgatgagagacgacgtcagctgctgaacatagaacagcagcgtatacaagga
gtgctggagtctggacactcccctcagcctggagtggcactctggtgctggagacagagg
gtcgtcagtctgatactcagtaacaaagggagcgaggccaaggaggcactccagcagttt
tcttgtctaccgactgccacagacagctcaggactgtttgctgaggtccttgaaggagcc
ttgacagatgacctccaggcagttcaagggaaggtctgcatggaggggagacaactctat
ctgtggcaggtactgacggagatgtacctgcagaaggggctgatggcagaggcagacact
accatcagacacactctacagctggcccaggccgacagtcagcgacaggtgcagctggag
tcactcctcaagttggcctctctgtcctaccaacaaatcatgtctgggagcggggacaag
caacagctgcggagtgtgtttgacgaggcggctgctgaggttctcaagattgatcctggc
tgctcggcagtgctgctgatgatgggagcgctgtccatcaagagtaacaaagtttctcgt
cgacactaccagcgggctctgattgcagggtcagtcaggtcaagtagaggtcatgatgtc
tctctggctcgtcaagctgtcatcaggaacatcatctactcccagaaggatcttcctcta
gctaagaaaattgctgatgaagcagtttgtgatggtgatgaggcaacagtgaacctgtac
tcccagctcaaaggagacgaagactga
DBGET
integrated database retrieval system
