Haliotis cracherodii (black abalone): 139475939
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Entry
139475939 CDS
T10814
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
hcra Haliotis cracherodii (black abalone)
Pathway
hcra04140
Autophagy - animal
hcra04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
hcra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
139475939
04148 Efferocytosis
139475939
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hcra04131
]
139475939
Membrane trafficking [BR:
hcra04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
139475939
Hops complex
139475939
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_1st
TPR_GEMI5
Beta-prop_IFT140_1st
Beta-prop_EML
zf-C3HC4_2
Beta-prop_EML_2
WD40_Prp19
zf-C3H2C3
zf-RING_2
zf-rbx1
Beta-prop_TEP1_2nd
Beta-prop_HPS5
TPR_11
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
139475939
NCBI-ProteinID:
XP_071115257
LinkDB
All DBs
Position
Unknown
AA seq
920 aa
AA seq
DB search
MAFLQWRRFNFFEKETVKDPETDQYFDQLKDKNVSVCASGRGQLIAGDFDGNIYLINRQL
QMSSFKGYEIRVSHLHQMKQHNILVSIGEDEQGVNPLIKVWNLEKMERGSPICTRISRAI
PGNKPTPVTCVSVHENLNYMAVGFENGVVVVYKGDVTRDRHSKSRTVFENPRPITGLSFK
TSGRDVILFVVTEIAVNAFNLTAKDQRETLESFGTKLRCTVTSDASHDNQLVIGRQDAVY
FYQPDGRGPCLAFEGEKLQLHWFRGYLVVVGKDNKNMPRAPVLGTQGLEMNTVTVYDIQN
KFIAYSAPYPDVIDVMCEWGSLYVLAGDRKLYQLQEKDTQTKLEMLFKKNNYTLAISLAK
SQQYDADGLIDIFTQYGDHLYSKGDHDGAIDQYIKTIGKLEASYVIRKFLDAQRIHNLTK
YLQALHKAQMATEEHTTLLLNCYTKLKDVSKLDEFIMTKDREVDFDVETAIKVCRQAGYH
KHALSLAEKHAKHEWYLKIQLEDIKDYHRALEYIGKLDFEEAENNLKQYGKILMSEVPKQ
TTQLLKRLCTDYKPMDKPLVDQLSMDGGLQRIQKANAEEFIHIFVNNSGKLTEFLEHMVE
VQPNSSNLVYNTLLELYLHQMMHEKDISPRVDRERKTLELLKNPDARYDIDHALILCQMN
NFKAGILYLYEKAHLYQQILRYHMEHDEYVHVIEACKKFGQQDPSLWVQALSFFARKEEN
CKAQLMEVLSHIDKKNLLPPLLVIQTLAHNSTATLSVVKDYIIRRLQLENDQIAEDERLI
KQYREDTERKRQQIEELKTSAKIFQASKCNICNHPLELPSVHFLCEPHSYHQHCFESYAE
TDTECPVCAAENRKIMDIIQAQEQTKDIHEHFHNQLERAQDGFSVVADYFGRGVFNKVTL
ITDSPTHQRTPQGSLSSRIP
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atggccttcctgcagtggagaagattcaacttctttgagaaggaaacggtcaaagaccca
gaaacagaccaatattttgatcagctcaaggacaagaatgtatctgtctgtgccagtggc
agagggcagcttattgctggcgactttgatggcaacatctatctcatcaatagacagcta
caaatgtcatctttcaagggttatgaaattagagttagccatcttcatcagatgaaacaa
cacaatatcttggtgtcgataggggaagatgaacaaggggtgaatccactgataaaagta
tggaacttggagaagatggagaggggaagtcctatatgtacgaggatatcaagggcgata
ccagggaacaaaccaacaccggtgacttgcgtgagtgtgcacgagaatctcaactacatg
gcagtggggtttgagaatggcgttgtcgtggtgtacaagggggatgtcactcgggacagg
cacagtaagtctcgaacagtttttgagaacccgcgaccaatcactgggctatcattcaag
acatctggcagagacgtcatcttgtttgttgtgactgaaatagctgtcaacgccttcaac
ctcacagctaaggatcaaagggaaactctggagtcatttggcacgaaactccgctgtacc
gttacaagtgatgccagccatgacaaccagctggtcattggcagacaggatgctgtgtac
ttctaccagccagatgggcgtggtccgtgtctggcgttcgagggggagaagcttcagctg
cactggttccggggctacctggtcgtagtggggaaggacaacaagaacatgccccgtgcc
ccggtcttaggcacccagggtcttgagatgaacactgtgacagtgtacgacatccagaac
aagttcatcgcctactccgctccctaccctgatgtcatcgatgtcatgtgtgagtggggg
tctctctacgtgttggccggggataggaagctgtaccagcttcaggagaaggacacacag
acgaagctggagatgctcttcaagaaaaataactacacactggccatcagcttggctaag
agtcagcagtacgatgctgacggcctgatcgacatcttcacccagtatggtgaccacctg
tacagcaagggggaccatgatggcgccattgaccagtatatcaaaaccatcggcaaactg
gaggcatcctatgttatcaggaagttcctagacgcccagcgcatccacaacctgaccaag
tacctgcaggctctacacaaggcccagatggccactgaggaacacacaacactcctcctc
aactgctacaccaagctcaaggacgtctccaagctggatgagttcatcatgacaaaggac
cgtgaagttgattttgatgtggagacggccatcaaagtgtgtcgccaggctggatatcac
aaacatgccctgtcgctggcagagaaacacgccaagcacgagtggtaccttaagatccag
ctggaggacatcaaggactatcacagggcgctcgagtacatcggcaagctggactttgag
gaggctgagaacaacttgaagcagtatgggaagattttgatgagtgaagtgccaaaacag
accactcagctgctgaagcgactctgtactgactacaagcccatggacaagcctctagtg
gatcagctgagtatggatggtggtttacaacgcattcagaaagccaatgcagaagaattc
atacacatatttgtgaacaactctggtaaactgaccgagttcttagagcacatggttgag
gtacagcccaactcctccaatctggtgtacaacaccctgctggagctgtacctccatcag
atgatgcatgagaaggacatatcacctcgagttgacagagaaaggaagacactggaactg
ttgaagaatcctgatgctcggtatgacattgaccacgccctgattctctgccagatgaac
aacttcaaggccggcatcctctacctgtatgagaaagctcacttgtatcagcagattctc
cgctaccacatggagcatgatgaatatgtgcacgtcatcgaggcttgcaagaagtttggg
cagcaggatcctagtctgtgggtacaagctctgtctttctttgcccggaaggaagaaaac
tgtaaagctcaactgatggaggtcctgtctcatattgacaagaagaatctgcttccccct
ctgctggtgatacaaaccctggcccacaactccaccgccacgctgtccgtcgtcaaggat
tacatcatccgacggcttcagctggaaaacgaccagattgcggaggatgaacggctcatt
aaacagtacagagaagacactgagaggaagagacaacagatagaagaactcaagacatca
gcgaagatattccaggcatccaagtgtaacatctgtaaccatcccctggagctgccatcc
gtacacttcctgtgtgaaccacattcctaccaccaacactgttttgagagctatgccgag
actgacacggagtgccctgtatgtgcagctgaaaataggaaaattatggatatcattcaa
gctcaagaacaaacaaaggacattcatgaacattttcacaatcagttggagagggcacaa
gatggcttctccgtggtcgccgactattttggtcgaggagtgttcaacaaggtgacgctg
atcacggactcgcccacccaccagcggactcctcaagggagtctctcctccaggataccc
tag
DBGET
integrated database retrieval system
