Candidatus Hamiltonella defensa (Acyrthosiphon pisum): HDEF_0534
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Entry
HDEF_0534 CDS
T00911
Symbol
recO
Name
(GenBank) gap repair protein, part of RecFOR complex
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
hde
Candidatus Hamiltonella defensa (Acyrthosiphon pisum)
Pathway
hde03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hde00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HDEF_0534 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hde03400
]
HDEF_0534 (recO)
DNA repair and recombination proteins [BR:
hde03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HDEF_0534 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
HDEF_0534 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
ACQ67288
UniProt:
C4K3Z5
LinkDB
All DBs
Position
531472..532176
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AA seq
234 aa
AA seq
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MHHHWHRSFILHRRSYSETSLILDLLTENEGRISLIAKGALRPRSALKGYLQPFTPLLLR
WSGKSAIKTLCGAEPISIAVPLTGIFLYSGLYVNELLSRLLLPNIDYRALFFDYLDCLEA
LASAQDTSERALRRFELALLTHLGYGVDFLHCVETGEPVVAQMTYRYQHEIGFIRSPEDD
SLGFTGHQLQSLAKGAFYDQETLKAAKRFTRIALKPHLGHRPLNSRSLFRKFNL
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgcatcatcactggcatcgatcgtttattcttcatcgccgctcttatagtgaaaccagt
ttaatactggatttattgactgaaaacgaagggcggatatctctgatcgcaaaaggagca
cttcgccctcgatctgcattaaaaggctatttacaaccttttacgcccttacttttgcgt
tggagcggaaaatcagcgataaaaaccttatgtggtgcggaacccatttctattgccgtg
cctttaactggcattttcctgtacagcggtttatatgttaatgagcttttatctcgcctg
ttgctaccaaatattgattatcgtgcgcttttttttgattatctcgactgtttggaggca
ttagccagtgctcaagatacatcggaacgggcactacgccgttttgaattagcactatta
acgcatctaggctacggtgttgattttcttcattgtgtagaaacgggcgaacctgtggtc
gctcaaatgacttatcgttatcaacatgaaatcggctttatcagaagcccggaggacgac
tctcttggttttaccggccatcaattacaatcactagccaaaggtgcattttatgatcaa
gagacactgaaagccgccaaacgttttactcgaatcgcattaaaacctcatcttggacat
cggcctttaaacagccgctcattatttagaaaatttaacctttag
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