KEGG   Candidatus Hamiltonella defensa (Acyrthosiphon pisum): HDEF_0575
Entry
HDEF_0575         CDS       T00911                                 
Name
(GenBank) putative single-strand DNA-binding protein
  KO
K03111  single-strand DNA-binding protein
Organism
hde  Candidatus Hamiltonella defensa (Acyrthosiphon pisum)
Pathway
hde03030  DNA replication
hde03430  Mismatch repair
hde03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hde00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HDEF_0575
   03430 Mismatch repair
    HDEF_0575
   03440 Homologous recombination
    HDEF_0575
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hde03032]
    HDEF_0575
   03400 DNA repair and recombination proteins [BR:hde03400]
    HDEF_0575
   03029 Mitochondrial biogenesis [BR:hde03029]
    HDEF_0575
DNA replication proteins [BR:hde03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    HDEF_0575
DNA repair and recombination proteins [BR:hde03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Other MMR factors
     HDEF_0575
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    HDEF_0575
Mitochondrial biogenesis [BR:hde03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial DNA replication factors
   Other Mitochondrial DNA replication factors
    HDEF_0575
SSDB
Motif
Pfam: SSB
Other DBs
NCBI-ProteinID: ACQ67319
UniProt: C4K426
LinkDB
Position
complement(564265..564699)
AA seq 144 aa
MIDIINHKRDNIMTINTVIFSGNLGGDCTTRSTANGKLIATFSLPVKQGYGEHEKISWVQ
CRMFGVKAEKLPIYLTRGTKVTVIGQFLLESWTGKDGIEKTTAVVLVNEMDFSSKQENKL
QQNQPLASQTESATSHQLDDDIPF
NT seq 435 nt   +upstreamnt  +downstreamnt
ttgattgacatcatcaatcataagcgagacaacataatgacaataaacaccgtgatattc
tccggcaatcttggcggcgactgtacgactcgtagcaccgcaaacggtaaactgattgcc
acattctctttacctgtcaagcaaggatacggtgagcatgagaaaatctcttgggtgcag
tgtcggatgtttggtgtcaaagctgaaaagttgcccatttatctgactagaggaaccaaa
gtgaccgtgattgggcaatttttgctcgaaagctggactggcaaagacggcatagaaaaa
acaaccgctgttgttctagttaacgagatggatttttccagtaagcaggaaaataaactt
cagcaaaatcaaccgttagcaagtcaaacagaaagtgcgacatcacatcaattggacgat
gacatccctttttga

KEGG   Candidatus Hamiltonella defensa (Acyrthosiphon pisum): HDEF_0919
Entry
HDEF_0919         CDS       T00911                                 
Name
(GenBank) putative single-strand DNA-binding protein
  KO
K03111  single-strand DNA-binding protein
Organism
hde  Candidatus Hamiltonella defensa (Acyrthosiphon pisum)
Pathway
hde03030  DNA replication
hde03430  Mismatch repair
hde03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hde00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HDEF_0919
   03430 Mismatch repair
    HDEF_0919
   03440 Homologous recombination
    HDEF_0919
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hde03032]
    HDEF_0919
   03400 DNA repair and recombination proteins [BR:hde03400]
    HDEF_0919
   03029 Mitochondrial biogenesis [BR:hde03029]
    HDEF_0919
DNA replication proteins [BR:hde03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    HDEF_0919
DNA repair and recombination proteins [BR:hde03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Other MMR factors
     HDEF_0919
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    HDEF_0919
Mitochondrial biogenesis [BR:hde03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial DNA replication factors
   Other Mitochondrial DNA replication factors
    HDEF_0919
SSDB
Motif
Pfam: SSB
Other DBs
NCBI-ProteinID: ACQ67630
UniProt: C4K426
LinkDB
Position
924860..925294
AA seq 144 aa
MIDIINHKRDNIMTINTVIFSGNLGGDCTTRSTANGKLIATFSLPVKQGYGEHEKISWVQ
CRMFGVKAEKLPIYLTRGTKVTVIGQFLLESWTGKDGIEKTTAVVLVNEMDFSSKQENKL
QQNQPLASQTESATSHQLDDDIPF
NT seq 435 nt   +upstreamnt  +downstreamnt
ttgattgacatcatcaatcataagcgagacaacataatgacaataaacaccgtgatattc
tccggcaatcttggcggcgactgtacgactcgtagcaccgcaaacggtaaactgattgcc
acattctctttacctgtcaagcaaggatacggtgagcatgagaaaatctcttgggtgcag
tgtcggatgtttggtgtcaaagctgaaaagttgcccatttatctgactagaggaaccaaa
gtgaccgtgattgggcaatttttgctcgaaagctggactggcaaagacggcatagaaaaa
acaaccgctgttgttctagttaacgagatggatttttccagtaagcaggaaaataaactt
cagcaaaatcaaccgttagcaagtcaaacagaaagtgcgacatcacatcaattggacgat
gacatccctttttga

KEGG   Candidatus Hamiltonella defensa (Acyrthosiphon pisum): HDEF_1536
Entry
HDEF_1536         CDS       T00911                                 
Symbol
ssb
Name
(GenBank) single-stranded DNA-binding protein
  KO
K03111  single-strand DNA-binding protein
Organism
hde  Candidatus Hamiltonella defensa (Acyrthosiphon pisum)
Pathway
hde03030  DNA replication
hde03430  Mismatch repair
hde03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hde00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HDEF_1536 (ssb)
   03430 Mismatch repair
    HDEF_1536 (ssb)
   03440 Homologous recombination
    HDEF_1536 (ssb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hde03032]
    HDEF_1536 (ssb)
   03400 DNA repair and recombination proteins [BR:hde03400]
    HDEF_1536 (ssb)
   03029 Mitochondrial biogenesis [BR:hde03029]
    HDEF_1536 (ssb)
DNA replication proteins [BR:hde03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    HDEF_1536 (ssb)
DNA repair and recombination proteins [BR:hde03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Other MMR factors
     HDEF_1536 (ssb)
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    HDEF_1536 (ssb)
Mitochondrial biogenesis [BR:hde03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial DNA replication factors
   Other Mitochondrial DNA replication factors
    HDEF_1536 (ssb)
SSDB
Motif
Pfam: SSB SSB_1 tRNA_anti-codon DUF6795 Flavi_NS5_thumb
Other DBs
NCBI-ProteinID: ACQ68155
UniProt: C4K6G2
LinkDB
Position
complement(1409002..1409547)
AA seq 181 aa
MASRGINKVILVGYLGQDPEVRRMPSGNPVTNITIATSESWRDKQTEEQKEKTEWHRVVI
FGKLAEVAEKYLRKGSQVYIEGALQTRKWTDQNGQDRYTTEVIVGVTGSMQMLGNRQNAI
VPASNISISNTASEWESQQSQMQSGHLLNSTKTVTKERSTAFSSPVHSVPSGEDFDDDIP
F
NT seq 546 nt   +upstreamnt  +downstreamnt
atggcgagtagaggtatcaataaggtgattttagtggggtatctaggccaagatccagag
gttcgccgtatgccaagtggtaaccctgttactaacattactatcgcaacttctgaaagt
tggcgtgataagcagacagaagagcaaaaggaaaaaacagaatggcacagggtcgtgata
ttcggaaaattagcagaagtagctgaaaaatatttgcgcaaagggtcgcaagtttatatt
gaaggcgctttacaaactcgtaaatggaccgatcaaaatggccaagatcgttatacgaca
gaagtgatcgtaggtgtcaccggcagcatgcaaatgcttggaaatcgccaaaatgcgatc
gtccctgcttccaatatctctattagcaataccgcttcggagtgggaatcacaacagtcg
caaatgcaaagtggccatttattaaatagcactaaaacagtaactaaagaacgatcgact
gctttttcatcaccagttcattcagtaccttcaggagaagattttgatgacgatattcca
ttctaa

DBGET integrated database retrieval system